Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RNU2-41P-201ENST00000410991 178 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 PRELID3BP1-201ENST00000457142 540 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 RPS29P11-201ENST00000496507 171 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.16□□□□□ -2.06
NEK1Q96PY6 AL121579.1-201ENST00000555129 305 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 AC233702.2-202ENST00000562547 291 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 AP001094.1-201ENST00000579805 193 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 MIR548S-201ENST00000581352 82 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 AC018462.2-201ENST00000605375 395 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.16□□□□□ -2.06
NEK1Q96PY6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 uc_338.20-201ENST00000621563 178 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NEK1Q96PY6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 RNU6-842P-201ENST00000384269 107 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 MIR499A-201ENST00000384903 122 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 MIR549A-201ENST00000385268 96 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 RNU6-1050P-201ENST00000410388 107 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 Z82188.1-201ENST00000436709 154 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.15□□□□□ -2.07
NEK1Q96PY6 SNORD5.1-201ENST00000458800 75 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 AC026782.1-201ENST00000512952 449 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.15□□□□□ -2.07
NEK1Q96PY6 GNAI2P1-201ENST00000541815 315 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 AC009994.1-201ENST00000606889 253 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.15□□□□□ -2.07
NEK1Q96PY6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.15□□□□□ -2.07
NEK1Q96PY6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NEK1Q96PY6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 RNU6-593P-201ENST00000364716 112 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 RNU4-9P-201ENST00000364951 139 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 RNU6-234P-201ENST00000365229 104 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 Y_RNA.482-201ENST00000384377 111 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 MIR32-201ENST00000384965 70 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 MIR487A-201ENST00000385009 80 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 MIR9-3-201ENST00000385084 90 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AL356432.1-201ENST00000405809 419 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 Y_RNA.594-201ENST00000410373 140 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 RNU6-174P-201ENST00000410406 106 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AL358453.1-201ENST00000422522 250 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AL353689.1-201ENST00000438895 199 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 OR2AQ1P-201ENST00000451972 200 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 RPL36AP21-201ENST00000490372 323 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC093259.1-201ENST00000509755 300 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 Y_RNA.670-201ENST00000516255 105 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 MIR4419B-201ENST00000577260 68 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 7SK.7-201ENST00000603504 247 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC005034.5-201ENST00000604219 466 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC005296.1-201ENST00000616145 209 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 AC099654.5-201ENST00000636479 350 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.14□□□□□ -2.07
NEK1Q96PY6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
NEK1Q96PY6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NEK1Q96PY6 ZNF702P-202ENST00000434269 1966 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 MIR378A-201ENST00000362177 66 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 Y_RNA.142-201ENST00000363491 102 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 RNU6-596P-201ENST00000365395 98 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 SNORA18.2-201ENST00000383865 132 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 HMGN2P18-201ENST00000450680 270 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 RPL7P42-201ENST00000481005 679 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.13□□□□□ -2.07
NEK1Q96PY6 Y_RNA.691-201ENST00000516611 103 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 Y_RNA.708-201ENST00000516950 96 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 RNA5SP490-201ENST00000517141 136 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.13□□□□□ -2.07
NEK1Q96PY6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 UBE2V2P2-201ENST00000587677 504 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 AC010928.2-201ENST00000588017 287 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 AC016727.2-201ENST00000603988 621 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.13□□□□□ -2.07
NEK1Q96PY6 AC009229.3-201ENST00000608056 282 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.13□□□□□ -2.07
NEK1Q96PY6 PISRT1.1-201ENST00000616930 107 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 AC137590.2-201ENST00000619709 240 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 SCARNA4-201ENST00000629045 128 ntBASIC2.13□□□□□ -2.07
NEK1Q96PY6 MTND4P12-201ENST00000498999 1377 ntBASIC2.12□□□□□ -2.07
NEK1Q96PY6 AL357139.1-201ENST00000407792 426 ntBASIC2.12□□□□□ -2.07
NEK1Q96PY6 MIR1262-201ENST00000408276 93 ntBASIC2.12□□□□□ -2.07
NEK1Q96PY6 RNU4-14P-201ENST00000410858 122 ntBASIC2.12□□□□□ -2.07
NEK1Q96PY6 RNU6-321P-201ENST00000410912 106 ntBASIC2.12□□□□□ -2.07
NEK1Q96PY6 NCOR1P3-201ENST00000420479 303 ntBASIC2.12□□□□□ -2.07
NEK1Q96PY6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.12□□□□□ -2.07
NEK1Q96PY6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.12□□□□□ -2.07
NEK1Q96PY6 snoU13.30-201ENST00000458951 104 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms