Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AIG1P1-201ENST00000503376 148 ntBASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 RNU2-58P-201ENST00000516403 183 ntBASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 SNORD19.2-201ENST00000516978 73 ntBASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 AC027176.1-201ENST00000560204 514 ntBASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 AC007256.1-201ENST00000392253 2765 ntBASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTNAP3BQ96NU0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 RNY4P6-201ENST00000363667 96 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 RNU6-497P-201ENST00000365316 104 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 RNU6-748P-201ENST00000384648 107 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 MIR548B-201ENST00000385247 97 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 RNA5SP201-201ENST00000410316 124 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 RNA5SP310-201ENST00000459084 116 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 IGKV3-31-201ENST00000523109 329 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 AC141557.1-201ENST00000540982 400 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 AC105245.1-201ENST00000581934 244 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 AC005972.2-201ENST00000604690 348 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 RNU6-91P-201ENST00000607774 107 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 FAM27D1-201ENST00000612308 341 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 PCGEM1.1-201ENST00000613431 131 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 uc_338.4-201ENST00000616635 176 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 AL159152.1-201ENST00000635019 2587 ntBASIC4.04□□□□□ -1.76
CNTNAP3BQ96NU0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 Y_RNA.198-201ENST00000364013 98 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 Y_RNA.366-201ENST00000365540 102 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 AC027124.2-201ENST00000428249 105 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 AC007751.1-201ENST00000529260 376 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 AC019288.1-201ENST00000557918 224 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 MIR7154-201ENST00000620673 73 ntBASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3BQ96NU0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 CPHL1P-201ENST00000461341 3407 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 AF117829.1-206ENST00000621883 3802 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 Y_RNA.73-201ENST00000362910 113 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-242P-201ENST00000384359 107 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 MIR873-201ENST00000401120 77 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 AC091826.1-201ENST00000514065 313 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 MIR5006-201ENST00000583027 110 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 IGLL4P-201ENST00000614590 133 ntBASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3BQ96NU0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 Y_RNA.290-201ENST00000364879 114 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 SNORA26-201ENST00000391286 122 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AC007064.1-201ENST00000412238 351 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AL157831.1-201ENST00000426134 473 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AC012671.1-201ENST00000451912 203 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 SRIP1-201ENST00000489235 288 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AC025445.1-201ENST00000502728 300 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 VWA8P1-201ENST00000510889 176 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 RNU2-13P-201ENST00000515909 113 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AC084364.2-201ENST00000546924 395 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 MIR4666B-201ENST00000578142 81 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AL034555.1-201ENST00000604816 211 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 MIR6076-201ENST00000617521 113 ntBASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms