Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 RNU6-360P-201ENST00000390944 104 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AL117342.1-201ENST00000404861 406 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 MIR320B2-201ENST00000408479 138 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AC060773.1-201ENST00000421698 310 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AL353572.1-201ENST00000442490 417 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 NFU1P2-201ENST00000448700 469 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 MTCO3P8-201ENST00000453691 755 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 RNU7-187P-201ENST00000458985 68 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AC114982.1-201ENST00000469402 321 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 HMGN1P13-201ENST00000505795 138 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 Y_RNA.675-201ENST00000516389 149 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AC015720.1-201ENST00000565251 277 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 MIR3976-201ENST00000606807 139 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
ZNF560Q96MR9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.61□□□□□ -2.15
ZNF560Q96MR9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF560Q96MR9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF560Q96MR9 Y_RNA.100-201ENST00000363141 102 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 RNU4-75P-201ENST00000364621 146 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 RNU6-975P-201ENST00000384296 105 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 RNU6-1235P-201ENST00000384559 107 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 DLGAP5P1-201ENST00000430307 464 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 AC245047.4-201ENST00000433189 144 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 RNU6-498P-201ENST00000459468 107 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF560Q96MR9 AC105313.1-201ENST00000509121 353 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 AC011406.1-201ENST00000512440 370 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 RNU6-1041P-201ENST00000516254 102 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 RNA5SP384-201ENST00000516615 116 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 AF250324.2-201ENST00000608299 610 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF560Q96MR9 AL138726.1-201ENST00000614873 333 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 SCARNA4-201ENST00000629045 128 ntBASIC1.6□□□□□ -2.15
ZNF560Q96MR9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.6□□□□□ -2.15
ZNF560Q96MR9 MIR378A-201ENST00000362177 66 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 SNORD50.1-201ENST00000362987 71 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RNU6-414P-201ENST00000363705 104 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RNU1-96P-201ENST00000364163 162 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RNU6-790P-201ENST00000384479 105 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RNU6-95P-201ENST00000384697 107 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 MIR586-201ENST00000385035 97 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RNU6-174P-201ENST00000410406 106 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AC004866.1-201ENST00000411748 78 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.59□□□□□ -2.15
ZNF560Q96MR9 CST2P1-201ENST00000425770 87 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 FTH1P12-201ENST00000432137 551 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 HMGB1P18-201ENST00000438801 619 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 PCMTD1P1-201ENST00000455560 355 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 snoU13.9-201ENST00000458927 103 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RNU7-66P-201ENST00000459469 62 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RPL26P26-201ENST00000480251 434 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 RPL36AP21-201ENST00000490372 323 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AC109635.3-201ENST00000529536 185 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AC084364.2-201ENST00000546924 395 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF560Q96MR9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
ZNF560Q96MR9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ZNF560Q96MR9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ZNF560Q96MR9 Y_RNA.151-201ENST00000363566 112 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 SNORA63D-201ENST00000364359 132 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 RNU6-332P-201ENST00000391193 108 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 HSPE1P9-201ENST00000440046 311 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 DAP3P1-201ENST00000441522 278 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 AC069257.2-201ENST00000441819 155 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 MTCO2P7-201ENST00000446518 666 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 AC074290.1-201ENST00000448883 135 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.58□□□□□ -2.16
ZNF560Q96MR9 AC079354.2-201ENST00000453523 154 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 MTND1P11-201ENST00000456661 876 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 HMGN2P9-201ENST00000476875 229 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
ZNF560Q96MR9 MTCO2P30-201ENST00000503662 364 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 RNU6-256P-201ENST00000516747 97 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 RNA5SP481-201ENST00000516814 122 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 RNA5SP54-201ENST00000516951 92 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.58□□□□□ -2.16
ZNF560Q96MR9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 SNORA77B-201ENST00000578179 125 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 SNORA59B-202ENST00000578183 701 ntBASIC1.58□□□□□ -2.16
ZNF560Q96MR9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.58□□□□□ -2.16
ZNF560Q96MR9 RNU6-623P-201ENST00000363143 105 ntBASIC1.57□□□□□ -2.16
ZNF560Q96MR9 Y_RNA.135-201ENST00000363439 95 ntBASIC1.57□□□□□ -2.16
ZNF560Q96MR9 SNORD115-8-201ENST00000363856 82 ntBASIC1.57□□□□□ -2.16
ZNF560Q96MR9 RNU4-13P-201ENST00000364019 141 ntBASIC1.57□□□□□ -2.16
ZNF560Q96MR9 SNORD115-38-201ENST00000365037 82 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms