Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC138Q96M89 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 AC091179.3-201ENST00000474761 144 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 RNA5SP282-201ENST00000516355 108 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 AC022868.1-201ENST00000517767 391 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
CCDC138Q96M89 AL160413.1-201ENST00000622780 310 ntBASIC2.55□□□□□ -2
CCDC138Q96M89 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC138Q96M89 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC138Q96M89 LINC02555-201ENST00000563933 1951 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 AC006026.1-201ENST00000444025 1803 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
CCDC138Q96M89 AC062016.1-201ENST00000355719 319 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 RNU6-859P-201ENST00000362728 107 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 RNU6-879P-201ENST00000364328 108 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 SNORA67.2-201ENST00000384300 149 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CCDC138Q96M89 Y_RNA.592-201ENST00000410274 109 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.54□□□□□ -2
CCDC138Q96M89 AC074290.1-201ENST00000448883 135 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 U8.22-201ENST00000459141 133 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 SNORA31.25-201ENST00000517242 134 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.54□□□□□ -2
CCDC138Q96M89 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.54□□□□□ -2
CCDC138Q96M89 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CCDC138Q96M89 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 AL080274.1-201ENST00000605565 220 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 AC130454.1-201ENST00000622948 401 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 AC068205.3-201ENST00000636385 468 ntBASIC2.54□□□□□ -2
CCDC138Q96M89 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.54□□□□□ -2
CCDC138Q96M89 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC138Q96M89 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC138Q96M89 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC138Q96M89 RNU6-1164P-201ENST00000364428 107 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 Y_RNA.252-201ENST00000364556 101 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 MIR144-201ENST00000384886 86 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 SNORD23.1-201ENST00000408212 104 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 AC063976.3-201ENST00000426849 329 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.53□□□□□ -2
CCDC138Q96M89 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 AL109933.2-201ENST00000452651 260 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
CCDC138Q96M89 RNU6-948P-201ENST00000516374 107 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 Y_RNA.683-201ENST00000516508 93 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 RNU1-117P-201ENST00000517041 158 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 CYCSP23-201ENST00000519781 313 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.53□□□□□ -2
CCDC138Q96M89 MIR4529-201ENST00000578110 78 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 MIR4435-1-201ENST00000582552 80 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 AC090971.5-201ENST00000621102 293 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 AL078596.1-201ENST00000624856 447 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 AC008873.1-201ENST00000625051 138 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 MTND5P35-201ENST00000557537 1720 ntBASIC2.53□□□□□ -2
CCDC138Q96M89 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.53□□□□□ -2.01
CCDC138Q96M89 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CCDC138Q96M89 RNU6-727P-201ENST00000363592 107 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 RNA5SP210-201ENST00000391034 120 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC138Q96M89 AC139712.2-201ENST00000424302 339 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC138Q96M89 MTCO1P44-201ENST00000441935 243 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 AC010095.1-201ENST00000443543 144 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 RNU1-131P-201ENST00000458943 161 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 RNU7-169P-201ENST00000459456 61 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 HMGN2P9-201ENST00000476875 229 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 Y_RNA.661-201ENST00000516003 99 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 AC125232.2-201ENST00000592457 143 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 MZT1P2-201ENST00000604387 248 ntBASIC2.52□□□□□ -2.01
CCDC138Q96M89 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC138Q96M89 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC138Q96M89 Y_RNA.5-201ENST00000362334 102 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 RNU1-58P-201ENST00000362413 163 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 MIR329-1-201ENST00000385028 80 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 Y_RNA.595-201ENST00000410403 105 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 RNA5SP504-201ENST00000410676 117 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 RNU6-1001P-201ENST00000411265 100 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC138Q96M89 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC138Q96M89 AC010531.2-201ENST00000465012 153 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 AC067942.3-201ENST00000512025 362 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 RNU2-34P-201ENST00000516534 121 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC138Q96M89 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC138Q96M89 AC091925.1-201ENST00000623204 462 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
CCDC138Q96M89 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC138Q96M89 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC138Q96M89 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC138Q96M89 AC009487.4-201ENST00000624969 3585 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 MIR340-201ENST00000362125 95 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 Y_RNA.11-201ENST00000362375 109 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 RNY3P11-201ENST00000364153 102 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 SNORD114-6-201ENST00000364393 72 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms