Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PDLIM2Q96JY6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 SNORA25.1-201ENST00000362326 128 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 RNU6-740P-201ENST00000364734 105 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 RNU6-487P-201ENST00000365430 104 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 RNU6-514P-201ENST00000384208 107 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 RNU6-886P-201ENST00000384319 105 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 Y_RNA.570-201ENST00000384750 101 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 MIR128-1-201ENST00000384921 82 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC104332.1-201ENST00000440471 797 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 RPL30P14-201ENST00000482744 348 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC024405.2-202ENST00000532731 184 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC008749.1-201ENST00000597650 306 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AL162424.1-201ENST00000602325 221 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AL078605.1-201ENST00000603529 500 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC010999.1-201ENST00000611856 324 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC006001.4-201ENST00000622243 395 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 IGHVIII-44-202ENST00000636235 289 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 AC005336.3-201ENST00000623833 2679 ntBASIC2.86□□□□□ -1.95
PDLIM2Q96JY6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 MIR411-201ENST00000362239 96 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 SNORD56.5-201ENST00000364281 72 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 Y_RNA.230-201ENST00000364348 109 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 SNORA26.3-201ENST00000391119 136 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 AL133475.1-201ENST00000404414 305 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 AL390729.2-201ENST00000416137 156 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 SNORA25.14-201ENST00000516481 132 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 AC115990.1-201ENST00000526957 301 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 AC005176.2-201ENST00000596933 147 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 AL357075.2-201ENST00000614906 189 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 ZNF204P-201ENST00000416749 2397 ntBASIC2.85□□□□□ -1.95
PDLIM2Q96JY6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 Y_RNA.331-201ENST00000365267 102 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 RNU6-19P-201ENST00000384718 107 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 MIR549A-201ENST00000385268 96 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 SNORA48.2-201ENST00000390926 124 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 Y_RNA.626-201ENST00000411288 95 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AC023141.4-201ENST00000412031 328 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 RPS26P42-201ENST00000413485 326 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 RPL23AP36-201ENST00000413895 458 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 PTGES3P4-201ENST00000426243 356 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 RPS15AP5-201ENST00000436276 388 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AC107626.1-201ENST00000471084 183 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AC083906.5-201ENST00000503722 328 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AC107393.1-201ENST00000512403 346 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 Y_RNA.679-201ENST00000516416 91 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AP002392.1-201ENST00000537692 208 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 CBX3P4-201ENST00000538909 354 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 AC105137.2-201ENST00000569073 466 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.84□□□□□ -1.95
PDLIM2Q96JY6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PDLIM2Q96JY6 AC002543.1-201ENST00000299783 1954 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 MTND5P35-201ENST00000557537 1720 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 MIR21-201ENST00000362134 72 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 MIR410-201ENST00000362222 80 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 Y_RNA.122-201ENST00000363331 96 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 Y_RNA.179-201ENST00000363844 90 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 Y_RNA.292-201ENST00000364904 97 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 Y_RNA.590-201ENST00000410140 107 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 RNU6-651P-201ENST00000411040 105 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 SUMO1P4-201ENST00000429430 302 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 POLR2KP2-201ENST00000438155 177 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 RPL23AP3-201ENST00000453844 468 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 SCGB1D5P-201ENST00000515134 247 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 Y_RNA.683-201ENST00000516508 93 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 SNORD59.2-201ENST00000516873 68 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 AC091152.3-201ENST00000604227 325 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 SNORD98-201ENST00000636377 67 ntBASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDLIM2Q96JY6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM2Q96JY6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
PDLIM2Q96JY6 RNU4-56P-201ENST00000364700 142 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms