Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 MIR335-201ENST00000362173 94 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.16-201ENST00000362421 102 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 RNU6-859P-201ENST00000362728 107 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 RNU6-926P-201ENST00000384075 107 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 SNORA70B-201ENST00000384210 135 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 RNU6-843P-201ENST00000384454 104 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AL603910.2-201ENST00000407268 136 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 RPS12P2-201ENST00000439728 269 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AP001324.2-201ENST00000461163 319 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 SNRPGP7-201ENST00000469016 106 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AC107626.1-201ENST00000471084 183 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 RPL31P41-201ENST00000477967 372 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AP001025.1-201ENST00000486139 332 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AIG1P1-201ENST00000503376 148 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AC008413.1-201ENST00000511864 177 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 SCARNA24.2-201ENST00000516968 130 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 SCARNA4-201ENST00000629045 128 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 AL450472.1-202ENST00000637286 180 ntBASIC2.71□□□□□ -1.98
VCPIP1Q96JH7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-1301P-201ENST00000362724 104 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.117-201ENST00000363294 101 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-879P-201ENST00000364328 108 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.277-201ENST00000364754 102 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-1286P-201ENST00000383871 107 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-17P-201ENST00000384245 107 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-937P-201ENST00000384325 106 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-18P-201ENST00000384527 107 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 MIR147B-201ENST00000390185 80 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 SNORD78.2-201ENST00000391076 69 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 AC074117.2-201ENST00000417130 397 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 AC016700.2-201ENST00000446011 156 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 AL513328.1-201ENST00000446460 224 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 AC004486.1-201ENST00000546846 233 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 AC024581.2-201ENST00000619986 252 ntBASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
VCPIP1Q96JH7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 SNORD81.1-201ENST00000363064 77 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 SNORD113-8-201ENST00000363497 74 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 RNA5SP456-201ENST00000364002 114 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.352-201ENST00000365439 102 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.541-201ENST00000384640 113 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 RNU6-748P-201ENST00000384648 107 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 MRPL35P1-201ENST00000404272 572 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 RNU2-14P-201ENST00000411053 191 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 AL358075.3-201ENST00000426289 226 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 AC087477.1-201ENST00000465747 340 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 RNU5F-8P-201ENST00000515941 111 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 RNU6-182P-201ENST00000516970 105 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 AC009779.6-201ENST00000603972 165 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 RMST_6.1-201ENST00000611980 203 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
VCPIP1Q96JH7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 SNORA29-201ENST00000384183 140 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 RNU6-622P-201ENST00000384272 103 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 RNU6-541P-201ENST00000384709 110 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 PIGPP3-201ENST00000425307 415 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AC007969.2-201ENST00000441891 191 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AC010095.1-201ENST00000443543 144 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AP000870.1-201ENST00000472927 406 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AF186996.7-201ENST00000492781 209 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 RRN3P3-201ENST00000549207 578 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AC130289.1-201ENST00000577321 73 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 MIR4446-201ENST00000578505 67 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AL356575.1-201ENST00000603008 283 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AC098479.1-201ENST00000609225 154 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 AL590808.1-201ENST00000618696 141 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.68□□□□□ -1.98
VCPIP1Q96JH7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 SNORD115-32-201ENST00000364079 82 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 SNORD32A-201ENST00000364805 84 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms