Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRCH3Q96II8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.51□□□□□ -1.69
LRCH3Q96II8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LRCH3Q96II8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRCH3Q96II8 AC092435.4-201ENST00000623012 4159 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.5□□□□□ -1.69
LRCH3Q96II8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LRCH3Q96II8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LRCH3Q96II8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
LRCH3Q96II8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRCH3Q96II8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRCH3Q96II8 RNU6-888P-201ENST00000363010 101 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 Y_RNA.510-201ENST00000384511 114 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 MIR548D2-201ENST00000384955 97 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 SNORD77.3-201ENST00000391113 65 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 MIR921-201ENST00000401133 56 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 AL031121.1-201ENST00000406553 254 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 AL353689.1-201ENST00000438895 199 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 RPL23AP67-201ENST00000465341 474 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 RN7SKP209-201ENST00000516888 304 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 JPX_2.1-201ENST00000614161 69 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.5□□□□□ -1.69
LRCH3Q96II8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRCH3Q96II8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LRCH3Q96II8 AC007496.3-201ENST00000624987 3443 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 SCN1A-220ENST00000641603 12506 ntBASIC4.5□□□□□ -1.69
LRCH3Q96II8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRCH3Q96II8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.5□□□□□ -1.69
LRCH3Q96II8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRCH3Q96II8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRCH3Q96II8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRCH3Q96II8 AC087190.4-201ENST00000574616 8334 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.49□□□□□ -1.69
LRCH3Q96II8 RNU4-36P-201ENST00000364294 144 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 AC023141.4-201ENST00000412031 328 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 AC073261.1-201ENST00000429409 121 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 RPL39P25-201ENST00000449384 154 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.49□□□□□ -1.69
LRCH3Q96II8 MRPS17P9-201ENST00000511924 393 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 RNA5SP446-201ENST00000515955 82 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 SNORD19.2-201ENST00000516978 73 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.49□□□□□ -1.69
LRCH3Q96II8 AC011604.1-201ENST00000545978 196 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 MIR4753-201ENST00000585119 83 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 AC104984.5-201ENST00000586878 94 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 AL162726.3-218ENST00000636401 95 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 MIR376A2-201ENST00000636782 80 ntBASIC4.49□□□□□ -1.69
LRCH3Q96II8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LRCH3Q96II8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRCH3Q96II8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
LRCH3Q96II8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRCH3Q96II8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRCH3Q96II8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.49□□□□□ -1.69
LRCH3Q96II8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRCH3Q96II8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.48□□□□□ -1.69
LRCH3Q96II8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRCH3Q96II8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LRCH3Q96II8 SNORD32B-201ENST00000364460 84 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 SNORA4.2-201ENST00000365313 147 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 RNA5SP151-201ENST00000365632 117 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 MIR300-201ENST00000401138 83 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.48□□□□□ -1.69
LRCH3Q96II8 RNA5SP246-201ENST00000458909 119 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 RNU7-61P-201ENST00000515897 61 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 MIR3117-201ENST00000584034 78 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 MIR6715A-201ENST00000615929 79 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 MIR7151-201ENST00000617477 60 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 AC006435.5-201ENST00000624486 112 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 Z73965.1-201ENST00000623412 2297 ntBASIC4.48□□□□□ -1.69
LRCH3Q96II8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRCH3Q96II8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.48□□□□□ -1.69
LRCH3Q96II8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRCH3Q96II8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRCH3Q96II8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRCH3Q96II8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRCH3Q96II8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRCH3Q96II8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 SNORD24-201ENST00000383884 75 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 RNU6-975P-201ENST00000384296 105 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 HDGFP1-201ENST00000405943 252 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 AC016717.1-201ENST00000448918 286 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 AL441985.1-201ENST00000457727 251 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 RPS27P22-201ENST00000478056 241 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 NDUFA4P2-201ENST00000489989 244 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 CYCSP30-201ENST00000546447 172 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.47□□□□□ -1.69
LRCH3Q96II8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LRCH3Q96II8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
LRCH3Q96II8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.46□□□□□ -1.69
LRCH3Q96II8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
LRCH3Q96II8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRCH3Q96II8 RNU6-690P-201ENST00000365242 106 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms