Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNU6-281P-201ENST00000384212 103 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 RNU6-166P-201ENST00000384371 107 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 MIR10B-201ENST00000385011 110 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 MIR329-1-201ENST00000385028 80 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 SNORA40C-201ENST00000391285 128 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 HMGN2P30-201ENST00000423237 256 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 RPL37P4-201ENST00000448908 268 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.13□□□□□ -1.91
CHFRQ96EP1 RPS27AP9-201ENST00000477681 438 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 RPL23AP49-201ENST00000492925 468 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 AC005840.1-201ENST00000498412 377 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.13□□□□□ -1.91
CHFRQ96EP1 GTF3AP2-201ENST00000557014 266 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 AL391261.3-201ENST00000557194 520 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 MIR3684-201ENST00000579779 74 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.13□□□□□ -1.91
CHFRQ96EP1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.13□□□□□ -1.91
CHFRQ96EP1 AL008718.3-201ENST00000610217 321 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 AC006001.4-201ENST00000622243 395 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
CHFRQ96EP1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHFRQ96EP1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CHFRQ96EP1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHFRQ96EP1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHFRQ96EP1 AC009541.1-201ENST00000438279 2662 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.12□□□□□ -1.91
CHFRQ96EP1 SNORA63.4-201ENST00000362763 126 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 RNU6-78P-201ENST00000362897 107 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 Y_RNA.230-201ENST00000364348 109 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 RNU6-1145P-201ENST00000384246 107 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 MIR487A-201ENST00000385009 80 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 BTF3L4P2-201ENST00000392798 346 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 RNU6-1001P-201ENST00000411265 100 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 AL353705.4-201ENST00000449661 238 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC108938.1-201ENST00000451204 136 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC139453.3-201ENST00000493276 369 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 RNU6-191P-201ENST00000516295 94 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 Y_RNA.686-201ENST00000516548 134 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 RNU7-121P-201ENST00000516604 62 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 SNORA31.21-201ENST00000517180 77 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.12□□□□□ -1.91
CHFRQ96EP1 DEFB131C-201ENST00000528817 165 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.12□□□□□ -1.91
CHFRQ96EP1 CYCSP39-201ENST00000565821 309 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC073308.1-201ENST00000623696 305 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC008873.1-201ENST00000625051 138 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC110079.1-202ENST00000635213 138 ntBASIC3.12□□□□□ -1.91
CHFRQ96EP1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CHFRQ96EP1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHFRQ96EP1 AC026241.1-201ENST00000517873 2142 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHFRQ96EP1 Y_RNA.182-201ENST00000363880 111 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 RNU5E-7P-201ENST00000365290 117 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 Y_RNA.357-201ENST00000365487 109 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 RNU6-1286P-201ENST00000383871 107 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 SNORA20-201ENST00000384662 132 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 MIR153-2-201ENST00000385225 87 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AL390729.2-201ENST00000416137 156 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 WARS2P1-201ENST00000429678 537 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.11□□□□□ -1.91
CHFRQ96EP1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.11□□□□□ -1.91
CHFRQ96EP1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.11□□□□□ -1.91
CHFRQ96EP1 snoU109.2-201ENST00000459316 135 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AL049874.1-201ENST00000489560 388 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AP002001.1-203ENST00000534002 267 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.11□□□□□ -1.91
CHFRQ96EP1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.11□□□□□ -1.91
CHFRQ96EP1 UBL5P4-201ENST00000562584 236 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AC090616.3-201ENST00000582184 217 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AC002545.1-201ENST00000592511 181 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AC008739.2-201ENST00000597006 317 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AL645944.1-201ENST00000603857 493 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AC019159.1-201ENST00000605094 187 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AL357075.2-201ENST00000614906 189 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 AC005296.1-201ENST00000616145 209 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.11□□□□□ -1.91
CHFRQ96EP1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CHFRQ96EP1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.1□□□□□ -1.91
CHFRQ96EP1 ZNF204P-201ENST00000416749 2397 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.1□□□□□ -1.91
CHFRQ96EP1 RNU4-80P-201ENST00000363200 141 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 RNU6-105P-201ENST00000363909 104 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 RNU6-1180P-201ENST00000364935 107 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 U8.10-201ENST00000384260 133 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 MIR514A1-201ENST00000385133 98 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 RNU6-239P-201ENST00000390990 99 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 RPS15AP5-201ENST00000436276 388 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.1□□□□□ -1.91
CHFRQ96EP1 snoU13.28-201ENST00000459235 104 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 RN7SL429P-201ENST00000479090 223 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 RN7SL489P-201ENST00000486185 223 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 RN7SL327P-201ENST00000488659 223 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 AC091874.1-201ENST00000511402 339 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 SNORA31.19-201ENST00000517079 126 ntBASIC3.1□□□□□ -1.91
CHFRQ96EP1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms