Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 Y_RNA.279-201ENST00000364763 95 ntBASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 RPL23AP75-201ENST00000491601 451 ntBASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 RNU6-566P-201ENST00000516790 107 ntBASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 MIR5094-201ENST00000578766 85 ntBASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 AC124303.1-201ENST00000605703 360 ntBASIC1.78□□□□□ -2.12
SNRNP40Q96DI7 CASC19-280ENST00000642102 1351 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 SNORD50.1-201ENST00000362987 71 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 MIR1283-1-201ENST00000408494 87 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 RNU2-40P-201ENST00000410833 196 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 MTND3P8-201ENST00000412909 339 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 AC079354.2-201ENST00000453523 154 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 AC090255.1-201ENST00000495779 349 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 snoU13.31-201ENST00000607291 104 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SNRNP40Q96DI7 CENPCP1-201ENST00000533085 2578 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 RNU4-9P-201ENST00000364951 139 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 RNU6-1283P-201ENST00000365314 105 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 RNA5SP37-201ENST00000365420 130 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 RNU6-418P-201ENST00000384035 107 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 MIR549A-201ENST00000385268 96 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 HMGN2P38-201ENST00000423806 265 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 MTCO3P8-201ENST00000453691 755 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AC010531.2-201ENST00000465012 153 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 MTND5P5-201ENST00000503764 376 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AC046134.1-201ENST00000514454 666 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 DEFB131C-201ENST00000528817 165 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 MIR4273-201ENST00000582824 84 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 DUXAP9-208ENST00000622815 614 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 ZNF204P-201ENST00000416749 2397 ntBASIC1.76□□□□□ -2.13
SNRNP40Q96DI7 MIR378A-201ENST00000362177 66 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 RNA5SP190-201ENST00000365222 118 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 MT-TL1-201ENST00000386347 75 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 MIR1287-201ENST00000408492 90 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 RPL21P111-201ENST00000418453 477 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AL357134.1-201ENST00000445848 426 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AC009237.7-201ENST00000447357 229 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 RNU6-1198P-201ENST00000516904 67 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 RRN3P3-201ENST00000549207 578 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 MIR5002-201ENST00000584713 97 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AC011712.1-201ENST00000588959 234 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 SNRPGP19-201ENST00000603826 189 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 SCARNA4-201ENST00000629045 128 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AL133216.2-202ENST00000634512 349 ntBASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SNRNP40Q96DI7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 Y_RNA.166-201ENST00000363730 102 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU6-457P-201ENST00000363999 107 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU6-1305P-201ENST00000364353 104 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU6-596P-201ENST00000365395 98 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 SNORA51.11-201ENST00000384442 131 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU6-306P-201ENST00000384617 107 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU6-541P-201ENST00000384709 110 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 MIR32-201ENST00000384965 70 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 MIR548K-201ENST00000408406 116 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU2-7P-201ENST00000410794 178 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 EBAG9P1-201ENST00000418955 543 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 AL139396.1-201ENST00000421137 167 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 AL358453.1-201ENST00000422522 250 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 MTCO1P44-201ENST00000441935 243 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RPL31P58-201ENST00000469001 379 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU6-948P-201ENST00000516374 107 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNU2-34P-201ENST00000516534 121 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 RNA5SP54-201ENST00000516951 92 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms