Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-727P-201ENST00000363592 107 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 RNU6-1020P-201ENST00000363684 107 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 RNU6-682P-201ENST00000363843 106 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 RNU6-1264P-201ENST00000383891 107 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 RNU6-662P-201ENST00000384253 104 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BRF1Q92994 RNA5SP475-201ENST00000410568 110 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 AC091179.1-201ENST00000461606 579 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 RPS29P2-201ENST00000479278 136 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 RNU6-191P-201ENST00000516295 94 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.47□□□□□ -1.85
BRF1Q92994 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
BRF1Q92994 AL355596.1-201ENST00000565399 3996 ntBASIC3.47□□□□□ -1.85
BRF1Q92994 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BRF1Q92994 AL035425.3-201ENST00000564206 4996 ntBASIC3.46□□□□□ -1.85
BRF1Q92994 AC008264.2-201ENST00000610193 3731 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 MAPK10-322ENST00000641485 4530 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BRF1Q92994 RNU6-746P-201ENST00000384112 109 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
BRF1Q92994 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 COX6CP10-201ENST00000416832 224 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 AC009963.1-201ENST00000417265 157 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 AC009969.1-201ENST00000438726 172 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 RNU6-406P-201ENST00000516470 107 ntBASIC3.46□□□□□ -1.86
BRF1Q92994 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.46□□□□□ -1.86
BRF1Q92994 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRF1Q92994 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
BRF1Q92994 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
BRF1Q92994 AC069528.2-201ENST00000624849 1991 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRF1Q92994 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF1Q92994 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF1Q92994 MIR422A-201ENST00000362286 90 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 RNU6-47P-201ENST00000383866 107 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 Y_RNA.415-201ENST00000384012 112 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 MIR767-201ENST00000390228 109 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 AC004866.1-201ENST00000411748 78 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 AC244505.4-201ENST00000434905 287 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.45□□□□□ -1.86
BRF1Q92994 AC004386.2-201ENST00000441858 148 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 SSXP5-201ENST00000443473 287 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 AC112771.1-201ENST00000463581 102 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 RPL36AP48-201ENST00000485521 314 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 AC145146.1-201ENST00000496370 254 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 RNU6-155P-201ENST00000516347 100 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 RN7SKP57-201ENST00000517248 293 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 SNORD11B-201ENST00000607707 90 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.45□□□□□ -1.86
BRF1Q92994 AC099778.2-201ENST00000610904 211 ntBASIC3.45□□□□□ -1.86
BRF1Q92994 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF1Q92994 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF1Q92994 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRF1Q92994 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
BRF1Q92994 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRF1Q92994 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRF1Q92994 RNU6-1248P-201ENST00000391096 64 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 AC027124.2-201ENST00000428249 105 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 AC009237.7-201ENST00000447357 229 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.44□□□□□ -1.86
BRF1Q92994 RPL27AP5-201ENST00000469428 449 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 SNORD59.2-201ENST00000516873 68 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 RNU2-12P-201ENST00000517216 168 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 AP005660.1-201ENST00000522972 293 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 DEFB131C-201ENST00000528817 165 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 AC087441.2-201ENST00000529141 262 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 AC011471.1-201ENST00000585766 187 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 AC068205.3-201ENST00000636385 468 ntBASIC3.44□□□□□ -1.86
BRF1Q92994 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.44□□□□□ -1.86
BRF1Q92994 RNU4-80P-201ENST00000363200 141 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 Y_RNA.435-201ENST00000384095 112 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 RNU6-918P-201ENST00000391219 106 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 RNA5SP354-201ENST00000391247 136 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 Y_RNA.597-201ENST00000410463 100 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.43□□□□□ -1.86
BRF1Q92994 RNA5SP341-201ENST00000516261 117 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 RNU6-861P-201ENST00000516745 106 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 RNU6-789P-201ENST00000517105 102 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BRF1Q92994 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.43□□□□□ -1.86
BRF1Q92994 MIR5195-201ENST00000583555 115 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 RPL17P51-201ENST00000605218 238 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 U6.106-201ENST00000636360 105 ntBASIC3.43□□□□□ -1.86
BRF1Q92994 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
BRF1Q92994 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
BRF1Q92994 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BRF1Q92994 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
BRF1Q92994 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.43□□□□□ -1.86
BRF1Q92994 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BRF1Q92994 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRF1Q92994 AL359854.1-201ENST00000614203 1594 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRF1Q92994 MIR181B1-201ENST00000385240 110 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 RNA5SP504-201ENST00000410676 117 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 AC097463.2-201ENST00000421074 142 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms