Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.18□□□□□ -1.9
UBXN4Q92575 MIR4680-201ENST00000580906 66 ntBASIC3.18□□□□□ -1.9
UBXN4Q92575 AC240442.1-201ENST00000616055 283 ntBASIC3.18□□□□□ -1.9
UBXN4Q92575 MIR8057-201ENST00000620957 69 ntBASIC3.18□□□□□ -1.9
UBXN4Q92575 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.18□□□□□ -1.9
UBXN4Q92575 AC245060.5-201ENST00000610778 3293 ntBASIC3.18□□□□□ -1.9
UBXN4Q92575 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBXN4Q92575 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBXN4Q92575 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBXN4Q92575 RNU6-1264P-201ENST00000383891 107 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 Y_RNA.455-201ENST00000384230 98 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 RNU6-1235P-201ENST00000384559 107 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 MIR181A2-201ENST00000384863 110 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 RNU6-823P-201ENST00000391042 103 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 MRPL35P1-201ENST00000404272 572 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 RNA5SP475-201ENST00000410568 110 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 RNU6-57P-201ENST00000411348 103 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 TOMM22P2-201ENST00000430735 237 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 AC016717.1-201ENST00000448918 286 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 AL109933.2-201ENST00000452651 260 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 U8.20-201ENST00000459445 131 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 RNU6-498P-201ENST00000459468 107 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 AC109925.1-201ENST00000478069 331 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 RNU1-104P-201ENST00000517280 175 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.17□□□□□ -1.9
UBXN4Q92575 AC022432.1-201ENST00000595739 310 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 AC104695.3-201ENST00000604052 296 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.17□□□□□ -1.9
UBXN4Q92575 snoZ196.1-201ENST00000625269 89 ntBASIC3.17□□□□□ -1.9
UBXN4Q92575 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.17□□□□□ -1.9
UBXN4Q92575 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
UBXN4Q92575 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
UBXN4Q92575 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBXN4Q92575 AC009487.4-201ENST00000624969 3585 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
UBXN4Q92575 MAPK10-266ENST00000641066 6555 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBXN4Q92575 RNU1-35P-201ENST00000362782 153 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 SNORA72.2-201ENST00000365028 127 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 MIR548B-201ENST00000385247 97 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 RAB28P5-201ENST00000427490 651 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.16□□□□□ -1.9
UBXN4Q92575 AP001486.1-201ENST00000463339 476 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 SCARNA15.1-201ENST00000516384 125 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 Y_RNA.715-201ENST00000517082 110 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.16□□□□□ -1.9
UBXN4Q92575 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.16□□□□□ -1.9
UBXN4Q92575 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBXN4Q92575 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
UBXN4Q92575 SNORA3A-201ENST00000364113 130 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 Y_RNA.439-201ENST00000384119 94 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 RNU6-1310P-201ENST00000384153 107 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 Y_RNA.551-201ENST00000384661 102 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 Z92545.1-201ENST00000411782 234 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 HMGN2P35-201ENST00000412164 270 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 ELOCP21-201ENST00000412558 336 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.15□□□□□ -1.91
UBXN4Q92575 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.15□□□□□ -1.91
UBXN4Q92575 AC067942.3-201ENST00000512025 362 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.15□□□□□ -1.91
UBXN4Q92575 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.15□□□□□ -1.91
UBXN4Q92575 AC090115.4-201ENST00000609970 188 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
UBXN4Q92575 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
UBXN4Q92575 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
UBXN4Q92575 RNU6-1266P-201ENST00000362794 105 ntBASIC3.14□□□□□ -1.91
UBXN4Q92575 RNU6-23P-201ENST00000363283 107 ntBASIC3.14□□□□□ -1.91
UBXN4Q92575 Y_RNA.380-201ENST00000365663 111 ntBASIC3.14□□□□□ -1.91
UBXN4Q92575 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.14□□□□□ -1.91
UBXN4Q92575 RN7SL504P-201ENST00000494496 287 ntBASIC3.14□□□□□ -1.91
UBXN4Q92575 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.14□□□□□ -1.91
UBXN4Q92575 RNU6-764P-201ENST00000516396 105 ntBASIC3.14□□□□□ -1.91
UBXN4Q92575 MIR3674-201ENST00000636576 68 ntBASIC3.14□□□□□ -1.91
UBXN4Q92575 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.14□□□□□ -1.91
UBXN4Q92575 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.14□□□□□ -1.91
UBXN4Q92575 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
UBXN4Q92575 Y_RNA.152-201ENST00000363578 100 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 SNORA67.1-201ENST00000364749 141 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 Y_RNA.458-201ENST00000384240 102 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 AL139095.1-201ENST00000404326 391 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 MTCO1P44-201ENST00000441935 243 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 AL118496.2-201ENST00000448300 230 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.13□□□□□ -1.91
UBXN4Q92575 AC087441.2-201ENST00000529141 262 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.13□□□□□ -1.91
UBXN4Q92575 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.13□□□□□ -1.91
UBXN4Q92575 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.13□□□□□ -1.91
UBXN4Q92575 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.13□□□□□ -1.91
UBXN4Q92575 AL109918.3-201ENST00000603072 338 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 AC005000.2-201ENST00000605468 310 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 AC010205.1-201ENST00000616668 449 ntBASIC3.13□□□□□ -1.91
UBXN4Q92575 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
UBXN4Q92575 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
UBXN4Q92575 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBXN4Q92575 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBXN4Q92575 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.12□□□□□ -1.91
UBXN4Q92575 AC073325.2-201ENST00000339545 159 ntBASIC3.12□□□□□ -1.91
UBXN4Q92575 MIR606-201ENST00000384851 96 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms