Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 MZT1P2-201ENST00000604387 248 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 MIR7157-201ENST00000635801 60 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 RNU1-72P-201ENST00000362976 153 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 snoU2_19.2-201ENST00000363024 80 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 MIR215-201ENST00000384858 110 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.581-201ENST00000391017 97 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 RNU2-20P-201ENST00000410425 191 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 RNU6-1203P-201ENST00000410703 110 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 AC027124.2-201ENST00000428249 105 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 RPL30P4-201ENST00000429309 333 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 IFNA11P-201ENST00000446352 526 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 RNU6-1132P-201ENST00000459214 107 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 DEFB131C-201ENST00000528817 165 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 AC233702.2-202ENST00000562547 291 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 TCL6_2.1-201ENST00000615162 119 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 AC010615.1-201ENST00000594254 1764 ntBASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATG4AQ8WYN0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 SNORD113-8-201ENST00000363497 74 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 RNU6-961P-201ENST00000363893 105 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 SNORA12-201ENST00000391162 147 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 AC004386.2-201ENST00000441858 148 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 UQCRBP2-201ENST00000447827 297 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 S100A11P2-201ENST00000467589 312 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 AC140059.1-201ENST00000489238 361 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 AC074133.1-201ENST00000515696 183 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 SCARNA3-201ENST00000517097 143 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 AK6P2-201ENST00000549020 471 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 MIR4423-201ENST00000580922 80 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 AC010620.2-201ENST00000600135 313 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 AC090517.3-201ENST00000625170 141 ntBASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.14-201ENST00000362415 103 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 SNORD81.1-201ENST00000363064 77 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.350-201ENST00000365409 98 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 SNORA18.2-201ENST00000383865 132 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.476-201ENST00000384347 108 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 U6atac.2-201ENST00000408644 118 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 RNU2-38P-201ENST00000410856 79 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AC004866.1-201ENST00000411748 78 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 RNU6-344P-201ENST00000516635 111 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 HSPE1P18-201ENST00000517602 280 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 RRN3P3-201ENST00000549207 578 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AC105245.1-201ENST00000581934 244 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 MIR3199-1-201ENST00000582434 88 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AP001282.2-201ENST00000616149 309 ntBASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ATG4AQ8WYN0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 RNU6-626P-201ENST00000363354 107 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 RNU6-727P-201ENST00000363592 107 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 RNU6-20P-201ENST00000384106 107 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.447-201ENST00000384184 113 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.562-201ENST00000384695 113 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.570-201ENST00000384750 101 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 MIR1289-1-201ENST00000408836 144 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.602-201ENST00000410535 92 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AC139712.2-201ENST00000424302 339 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AC009237.7-201ENST00000447357 229 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 RPS23P5-201ENST00000495419 428 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 RNU6-496P-201ENST00000516145 99 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 RNU6-56P-201ENST00000516986 93 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AC004486.1-201ENST00000546846 233 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AC018448.1-201ENST00000552843 316 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 MIR5006-201ENST00000583027 110 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AL713866.2-201ENST00000603579 219 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 RPL17P51-201ENST00000605218 238 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 AC093732.2-201ENST00000607950 274 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms