Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01006Q8NI28 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.106-201ENST00000363189 100 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.138-201ENST00000363462 102 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.146-201ENST00000363549 102 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 U3.9-201ENST00000363823 204 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 SNORD115-32-201ENST00000364079 82 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU6-743P-201ENST00000364151 106 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 SNORA18.2-201ENST00000383865 132 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU6-17P-201ENST00000384245 107 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.463-201ENST00000384271 102 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU6-18P-201ENST00000384527 107 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU2-48P-201ENST00000410694 191 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU2-32P-201ENST00000411193 191 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 AC027124.2-201ENST00000428249 105 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 U8.22-201ENST00000459141 133 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 AP000870.1-201ENST00000472927 406 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 AC107032.1-201ENST00000485945 480 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU7-175P-201ENST00000515915 61 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNA5SP182-201ENST00000516064 82 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU6-307P-201ENST00000516743 106 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RNU6-1153P-201ENST00000516760 105 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 EIF4A1P12-201ENST00000551910 141 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 AC090517.1-201ENST00000569307 266 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01006Q8NI28 SNORD14A-201ENST00000606526 91 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 RMST_6.1-201ENST00000611980 203 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 AC245884.12-201ENST00000615364 59 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 MIR1248-201ENST00000629190 106 ntBASIC1.6□□□□□ -2.15
LINC01006Q8NI28 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01006Q8NI28 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
LINC01006Q8NI28 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
LINC01006Q8NI28 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.319-201ENST00000365138 92 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.460-201ENST00000384255 102 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.496-201ENST00000384444 101 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 RNU1-148P-201ENST00000384472 162 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 SNORA80E-201ENST00000384744 137 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 MIR561-201ENST00000385216 97 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 MIR153-2-201ENST00000385225 87 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 MIR524-201ENST00000385242 87 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 RNU6-308P-201ENST00000390957 107 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 RNU6-700P-201ENST00000391043 107 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 MIR190B-201ENST00000401119 79 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AL139156.1-201ENST00000412785 841 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 CYCSP49-201ENST00000420810 319 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 MTCYBP10-201ENST00000424905 650 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AC009238.1-201ENST00000442165 424 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AC009237.6-201ENST00000446969 424 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.706-201ENST00000516933 99 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 RNU6-264P-201ENST00000517134 104 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 CYCSP26-201ENST00000534107 320 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AC018630.3-201ENST00000542637 96 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 SUB1P3-201ENST00000564581 315 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AL080274.1-201ENST00000605565 220 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 AC022202.1-201ENST00000613515 211 ntBASIC1.59□□□□□ -2.15
LINC01006Q8NI28 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01006Q8NI28 ZNF204P-201ENST00000416749 2397 ntBASIC1.59□□□□□ -2.16
LINC01006Q8NI28 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
LINC01006Q8NI28 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.59□□□□□ -2.16
LINC01006Q8NI28 Y_RNA.5-201ENST00000362334 102 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 SNORA25B-201ENST00000365507 128 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 SNORD42.2-201ENST00000365570 69 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 RNU6-546P-201ENST00000383991 107 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 AL078595.1-201ENST00000404458 226 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01006Q8NI28 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01006Q8NI28 MTCO3P8-201ENST00000453691 755 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 RNU7-87P-201ENST00000459343 62 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01006Q8NI28 ATP5EP1-201ENST00000510257 156 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 SNORA4.4-201ENST00000515921 135 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 RNU6-1098P-201ENST00000516772 96 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 RNU6-58P-201ENST00000517143 103 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 RNU6-667P-201ENST00000517186 102 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 AC022616.8-201ENST00000533569 253 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.58□□□□□ -2.16
LINC01006Q8NI28 AC009127.3-201ENST00000570531 403 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01006Q8NI28 AC100812.1-201ENST00000607622 580 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.58□□□□□ -2.16
LINC01006Q8NI28 AL132822.1-201ENST00000617063 513 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 AC087588.2-201ENST00000617667 426 ntBASIC1.58□□□□□ -2.16
LINC01006Q8NI28 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.58□□□□□ -2.16
LINC01006Q8NI28 MTND5P16-201ENST00000460269 1703 ntBASIC1.57□□□□□ -2.16
LINC01006Q8NI28 AC073544.1-201ENST00000600110 1595 ntBASIC1.57□□□□□ -2.16
LINC01006Q8NI28 MIRLET7G-201ENST00000362280 84 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms