Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIR3684-201ENST00000579779 74 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 MIR7851-201ENST00000610611 160 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 AC096577.2-201ENST00000611455 153 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 AL365222.1-201ENST00000614661 98 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.25□□□□□ -1.89
NUP43Q8NFH3 AL513302.2-201ENST00000562313 1842 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 AC026241.1-201ENST00000517873 2142 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NUP43Q8NFH3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP43Q8NFH3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 AC100821.1-201ENST00000523153 2479 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 RNA5SP72-201ENST00000364442 117 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 RNU6-855P-201ENST00000410395 104 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 AC006445.1-201ENST00000491925 405 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 AC026403.1-201ENST00000518938 295 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 AC025281.1-201ENST00000567026 265 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 MIR4298-201ENST00000584380 73 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP43Q8NFH3 AP003122.5-201ENST00000527668 3766 ntBASIC3.24□□□□□ -1.89
NUP43Q8NFH3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP43Q8NFH3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP43Q8NFH3 RNU6-899P-201ENST00000363947 107 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.293-201ENST00000364908 93 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.341-201ENST00000365341 102 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.456-201ENST00000384232 111 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 MIR184-201ENST00000384962 84 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 AL365496.1-201ENST00000426885 215 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 CYCSP4-201ENST00000429682 331 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.23□□□□□ -1.89
NUP43Q8NFH3 AC110768.1-201ENST00000509222 400 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 SCARNA8-201ENST00000515924 131 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 HSPE1P18-201ENST00000517602 280 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP43Q8NFH3 MIR548X2-201ENST00000579776 100 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.802-201ENST00000614892 130 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 AC009093.8-201ENST00000641769 292 ntBASIC3.23□□□□□ -1.89
NUP43Q8NFH3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP43Q8NFH3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP43Q8NFH3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP43Q8NFH3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 SNORA48.5-201ENST00000391143 135 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 Z75741.1-201ENST00000446793 314 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 RNU7-170P-201ENST00000459303 61 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 RPL23AP67-201ENST00000465341 474 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 AC106707.2-201ENST00000484182 374 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 RNU6-453P-201ENST00000516819 85 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 AC107934.2-201ENST00000518653 310 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 AC022616.8-201ENST00000533569 253 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 AC109810.1-201ENST00000534066 224 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 MIR3658-201ENST00000636291 56 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NUP43Q8NFH3 AL136164.4-201ENST00000625013 2135 ntBASIC3.22□□□□□ -1.89
NUP43Q8NFH3 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.89
NUP43Q8NFH3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
NUP43Q8NFH3 AC010332.2-201ENST00000613083 1904 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 Y_RNA.24-201ENST00000362508 103 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 Y_RNA.81-201ENST00000362997 102 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 MIR526A2-201ENST00000390198 65 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 Z98941.1-201ENST00000407764 100 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 HMGN2P31-201ENST00000432430 273 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 RNU7-141P-201ENST00000459304 62 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 RPL36AP48-201ENST00000485521 314 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 AC107027.2-201ENST00000512197 115 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 uc_338.14-201ENST00000613162 166 ntBASIC3.21□□□□□ -1.9
NUP43Q8NFH3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NUP43Q8NFH3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NUP43Q8NFH3 SNORD32B-201ENST00000364460 84 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms