Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 MIR3136-201ENST00000583498 78 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 snoU18.1-201ENST00000629629 71 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 RNA5SP475-201ENST00000410568 110 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 PTGES3P4-201ENST00000426243 356 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 IFNA11P-201ENST00000446352 526 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 RNU5F-2P-201ENST00000516066 82 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 RNU7-200P-201ENST00000516105 62 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 RNU6-1219P-201ENST00000516143 112 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 MTND5P41-201ENST00000517498 206 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 AL356575.1-201ENST00000603008 283 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 SNRPGP20-201ENST00000604477 205 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 AL365265.1-201ENST00000621045 234 ntBASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
LINC00116Q8NCU8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 AL359854.1-201ENST00000614203 1594 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 RNU1-62P-201ENST00000362599 164 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 Y_RNA.304-201ENST00000365011 112 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 RNY1P5-201ENST00000383890 115 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 RNU6-211P-201ENST00000384047 107 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 CBX3P9-201ENST00000402326 552 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 AC023141.4-201ENST00000412031 328 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 RPS15AP5-201ENST00000436276 388 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 RPL30P14-201ENST00000482744 348 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 RNA5SP24-201ENST00000516478 95 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 DEFB117-201ENST00000602356 141 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 AC004832.4-201ENST00000608952 331 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 MIR6076-201ENST00000617521 113 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LINC00116Q8NCU8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 MIR613-201ENST00000385248 95 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 RNA5SP274-201ENST00000410484 108 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 RNU6-394P-201ENST00000410735 107 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 RNU6-1199P-201ENST00000411249 104 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 RPL32P35-201ENST00000415214 394 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 AC103975.1-201ENST00000482506 483 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 RNU6-237P-201ENST00000515985 71 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 SNORD53-201ENST00000579969 78 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 AC091152.3-201ENST00000604227 325 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 AC064859.1-201ENST00000624741 174 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 MIR3674-201ENST00000636576 68 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 AC092435.3-201ENST00000565538 3654 ntBASIC3.54□□□□□ -1.84
LINC00116Q8NCU8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 RNU6-529P-201ENST00000363383 104 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 Y_RNA.435-201ENST00000384095 112 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 MIR184-201ENST00000384962 84 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 HSPE1P26-201ENST00000405341 275 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 SNORA3.2-201ENST00000408221 125 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 RNU2-54P-201ENST00000410299 190 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 CYCSP48-201ENST00000417124 323 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 SNRPGP5-201ENST00000456003 220 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 RN7SL633P-201ENST00000488974 297 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 RNU6-107P-201ENST00000516643 102 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 AC109329.2-201ENST00000519658 482 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 AL034555.1-201ENST00000604816 211 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 AC005520.5-201ENST00000613926 164 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 AC002076.2-201ENST00000617362 122 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 MIR7843-201ENST00000622274 79 ntBASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.53□□□□□ -1.84
LINC00116Q8NCU8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.53□□□□□ -1.85
LINC00116Q8NCU8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.52□□□□□ -1.85
LINC00116Q8NCU8 Y_RNA.291-201ENST00000364886 113 ntBASIC3.52□□□□□ -1.85
LINC00116Q8NCU8 Y_RNA.398-201ENST00000383952 99 ntBASIC3.52□□□□□ -1.85
LINC00116Q8NCU8 RNU2-49P-201ENST00000410666 184 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms