Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MIR1253-201ENST00000408273 105 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 USMG5P1-201ENST00000425964 177 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 HMGN2P34-201ENST00000437647 269 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 AC016717.1-201ENST00000448918 286 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 RNU7-175P-201ENST00000515915 61 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 RNU1-54P-201ENST00000517181 120 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 AC104581.2-201ENST00000572227 430 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 SNORA59B-202ENST00000578183 701 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 MIR6873-201ENST00000622788 63 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 MIR219B-201ENST00000637023 88 ntBASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01561Q8N1V8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 MIR126-201ENST00000362291 85 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 RNU6-831P-201ENST00000384548 107 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 RNU6-950P-201ENST00000384651 107 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 RNU6-159P-201ENST00000391080 106 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 MIR1277-201ENST00000408536 78 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 RNA5SP504-201ENST00000410676 117 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 RNU4-53P-201ENST00000410828 140 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 RNU6-57P-201ENST00000411348 103 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AL589823.1-201ENST00000429577 183 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 Z82188.1-201ENST00000436709 154 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AC107393.1-201ENST00000512403 346 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 SNORA25.14-201ENST00000516481 132 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 RNU6-566P-201ENST00000516790 107 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AL590705.4-201ENST00000532209 134 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 MIR4273-201ENST00000582824 84 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AC093913.1-201ENST00000614178 329 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AC100810.6-201ENST00000638068 285 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 AC068137.4-201ENST00000638485 296 ntBASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01561Q8N1V8 MTND5P6-201ENST00000422338 1798 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 MIR208A-201ENST00000362287 71 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 RNU6-593P-201ENST00000364716 112 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 RNU6-1240P-201ENST00000365155 104 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 RNU6-510P-201ENST00000391239 108 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 snoU13.27-201ENST00000459278 104 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 RPL30P10-201ENST00000488148 337 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 AC025647.1-201ENST00000517879 253 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 AC243829.7-201ENST00000633081 225 ntBASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
LINC01561Q8N1V8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 MIR302D-201ENST00000362275 68 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 RNU6-873P-201ENST00000363833 107 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 RNU6-595P-201ENST00000363944 107 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 RNU6-793P-201ENST00000384233 104 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 MIR487A-201ENST00000385009 80 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 RPS20P15-201ENST00000412792 311 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 HSPE1P24-201ENST00000450782 238 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 SNORD5.1-201ENST00000458800 75 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AC093303.1-201ENST00000514549 295 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 RNU1-117P-201ENST00000517041 158 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 DEFB122-202ENST00000569013 197 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 MIR1273D-201ENST00000577266 86 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 MIR5089-201ENST00000580047 84 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AC022432.1-201ENST00000595739 310 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 MIR6798-201ENST00000612887 67 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AC006001.4-201ENST00000622243 395 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 MTND4P12-201ENST00000498999 1377 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 AC245060.5-201ENST00000610778 3293 ntBASIC1.3□□□□□ -2.2
LINC01561Q8N1V8 RNA5SP289-201ENST00000362332 137 ntBASIC1.29□□□□□ -2.2
LINC01561Q8N1V8 Y_RNA.287-201ENST00000364853 94 ntBASIC1.29□□□□□ -2.2
LINC01561Q8N1V8 Y_RNA.301-201ENST00000364990 103 ntBASIC1.29□□□□□ -2.2
LINC01561Q8N1V8 SNORD115-47-201ENST00000391226 86 ntBASIC1.29□□□□□ -2.2
LINC01561Q8N1V8 AL356776.1-201ENST00000406574 447 ntBASIC1.29□□□□□ -2.2
LINC01561Q8N1V8 MIR1185-2-201ENST00000408687 86 ntBASIC1.29□□□□□ -2.2
LINC01561Q8N1V8 AC016909.1-201ENST00000415916 166 ntBASIC1.29□□□□□ -2.2
LINC01561Q8N1V8 COX6CP10-201ENST00000416832 224 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms