Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC073534.2-201ENST00000620377 381 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC010615.1-201ENST00000594254 1764 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 Y_RNA.132-201ENST00000363421 102 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 SNORD116-2-201ENST00000384274 95 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 SNORA67.2-201ENST00000384300 149 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 SNORD116-6-201ENST00000384711 96 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 MIR300-201ENST00000401138 83 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AL161935.2-201ENST00000414627 60 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 ARL5AP1-201ENST00000418991 388 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 MTCO3P8-201ENST00000453691 755 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC107401.1-201ENST00000503426 685 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 RN7SKP179-201ENST00000516126 217 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC090821.2-201ENST00000523552 176 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AL512360.1-201ENST00000555346 234 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AL353149.1-201ENST00000610667 244 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 TCL6_2.1-201ENST00000615162 119 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC126177.8-201ENST00000618339 1015 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 BX322639.1-202ENST00000423987 2213 ntBASIC1.35□□□□□ -2.19
CCDC65Q8IXS2 AC233981.2-201ENST00000611524 1614 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 OR4G1P-203ENST00000641984 1631 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 RNU6-271P-201ENST00000363858 105 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 RNU6-968P-201ENST00000384076 107 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 RNU6-483P-201ENST00000384088 108 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1042P-201ENST00000384204 107 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 MIR520A-201ENST00000384862 85 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 RNU6-360P-201ENST00000390944 104 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 RNU1-78P-201ENST00000391248 165 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 RNU2-16P-201ENST00000410712 136 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 SNRPEP10-201ENST00000420249 274 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 ERLEC1P1-201ENST00000433806 578 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 OR2AQ1P-201ENST00000451972 200 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 Y_RNA.665-201ENST00000516177 98 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 AC069114.2-201ENST00000604699 304 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 MIR3976-201ENST00000606807 139 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 AL133215.3-201ENST00000609801 448 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 AL157834.3-201ENST00000615543 103 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
CCDC65Q8IXS2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CCDC65Q8IXS2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.41-201ENST00000362646 102 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 SNORD50.1-201ENST00000362987 71 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 RNU6-214P-201ENST00000384130 107 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 RNU6-975P-201ENST00000384296 105 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 JTBP1-201ENST00000441314 247 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AC016717.1-201ENST00000448918 286 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 RNU7-187P-201ENST00000458985 68 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 RPL36AP21-201ENST00000490372 323 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 RPL23AP75-201ENST00000491601 451 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 MTCO1P29-201ENST00000496868 288 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.704-201ENST00000516851 102 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AC026470.2-201ENST00000561492 181 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 MIR5006-201ENST00000583027 110 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 NBR2-204ENST00000587322 63 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AC010525.2-201ENST00000590920 195 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 AP000907.4-201ENST00000604143 237 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.33□□□□□ -2.2
CCDC65Q8IXS2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 SNORA33-201ENST00000363664 130 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 RNU1-96P-201ENST00000364163 162 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.615-201ENST00000410769 117 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 AC009237.7-201ENST00000447357 229 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 AC079354.2-201ENST00000453523 154 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 RNU7-66P-201ENST00000459469 62 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 RNU2-34P-201ENST00000516534 121 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 MIR4769-201ENST00000584126 77 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 AC245060.5-201ENST00000610778 3293 ntBASIC1.32□□□□□ -2.2
CCDC65Q8IXS2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.256-201ENST00000364594 104 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 SNORD1A-201ENST00000364968 72 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 MIR521-1-201ENST00000384902 87 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms