Protein–RNA interactions for Protein: Q8IXM3

MRPL41, 39S ribosomal protein L41, mitochondrial, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL41Q8IXM3 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 RN7SL600P-201ENST00000581811 299 ntBASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 POLR3GP1-201ENST00000594073 261 ntBASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 AL365222.1-201ENST00000614661 98 ntBASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MRPL41Q8IXM3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 MFSD8-236ENST00000641509 4050 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AL356292.1-201ENST00000283110 373 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 MIR372-201ENST00000362225 67 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 SNORA20-201ENST00000384662 132 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 MIR218-1-201ENST00000384999 110 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 MIR134-201ENST00000385258 73 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AL356095.1-201ENST00000417217 199 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 RPS12P18-201ENST00000442381 270 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AC099522.1-202ENST00000514718 367 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 RNA5SP20-201ENST00000515976 84 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 RNU6-561P-201ENST00000516222 102 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 RNU6-948P-201ENST00000516374 107 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 RNU6-965P-201ENST00000516721 96 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 RNU7-143P-201ENST00000516781 65 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AC025627.2-201ENST00000576220 160 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AP003357.1-201ENST00000604497 148 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AC005972.2-201ENST00000604690 348 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 MIR6867-201ENST00000610636 67 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AC013412.1-201ENST00000610687 192 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AL773545.4-201ENST00000637262 310 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 AL513478.4-201ENST00000641636 310 ntBASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
MRPL41Q8IXM3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RNU1-72P-201ENST00000362976 153 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RNA5SP283-201ENST00000365604 119 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RNU6-1323P-201ENST00000384025 107 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RNU6-735P-201ENST00000410612 107 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RPL30P4-201ENST00000429309 333 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 AL117339.2-201ENST00000430475 180 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 AC008267.6-201ENST00000441664 139 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 AC008155.2-201ENST00000464337 397 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RN7SL330P-201ENST00000469709 307 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RPL23AP54-201ENST00000495129 419 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 RNU7-116P-201ENST00000516940 62 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 AC112693.2-201ENST00000556538 232 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 AC127455.1-201ENST00000565496 145 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 AC096577.2-201ENST00000611455 153 ntBASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MRPL41Q8IXM3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 Z82209.1-201ENST00000422141 2135 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 RNU1-18P-201ENST00000363062 164 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 RNA5SP130-201ENST00000364431 114 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 RNU6-418P-201ENST00000384035 107 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 Y_RNA.521-201ENST00000384560 114 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 SNORA48.7-201ENST00000391302 135 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 MTND4LP9-201ENST00000427694 174 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 AC083863.1-201ENST00000438811 231 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 RN7SL93P-201ENST00000463035 293 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 RN7SL604P-201ENST00000492589 296 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 MIR3199-1-201ENST00000582434 88 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 MIR5684-201ENST00000585074 65 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 MIR7515-201ENST00000637837 67 ntBASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MRPL41Q8IXM3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPL41Q8IXM3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPL41Q8IXM3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPL41Q8IXM3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms