Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-174P-201ENST00000410406 106 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 SRIP3-201ENST00000413200 219 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 AL603825.1-201ENST00000438481 80 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 MTND3P10-201ENST00000450967 341 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 SNORD5.1-201ENST00000458800 75 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 ATP5EP1-201ENST00000510257 156 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 AL117351.2-201ENST00000513571 157 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 AC010928.2-201ENST00000588017 287 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
CCDC60Q8IWA6 SNORA72.1-201ENST00000363485 129 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 RNU6-438P-201ENST00000365561 103 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 RNU6-1026P-201ENST00000384465 108 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AL356432.1-201ENST00000405809 419 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 RNU6-1050P-201ENST00000410388 107 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC245102.2-201ENST00000448956 180 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.670-201ENST00000516255 105 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC009229.3-201ENST00000608056 282 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AL355073.2-201ENST00000612106 557 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC005562.2-201ENST00000618264 111 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 AC137590.2-201ENST00000619709 240 ntBASIC1.92□□□□□ -2.1
CCDC60Q8IWA6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 RNU6-593P-201ENST00000364716 112 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.303-201ENST00000364998 94 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 MIR518A2-201ENST00000384966 87 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 RPS26P42-201ENST00000413485 326 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 AL445305.1-201ENST00000432577 575 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 SNRPEP8-201ENST00000442866 260 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 AL035666.1-201ENST00000446195 348 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 snoU13.30-201ENST00000458951 104 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 TOMM22P6-201ENST00000465035 409 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 RPL7P42-201ENST00000481005 679 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 RPL30P10-201ENST00000488148 337 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 RPS23P5-201ENST00000495419 428 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 RNU2-44P-201ENST00000516795 194 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 Y_RNA.708-201ENST00000516950 96 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 AP005660.1-201ENST00000522972 293 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 CBX3P8-201ENST00000532412 525 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 MIR5696-201ENST00000578474 85 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 MIR5006-201ENST00000583027 110 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 7SK.7-201ENST00000603504 247 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 PISRT1.1-201ENST00000616930 107 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 AC099654.5-201ENST00000636479 350 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 ZNF204P-201ENST00000416749 2397 ntBASIC1.91□□□□□ -2.1
CCDC60Q8IWA6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.9□□□□□ -2.1
CCDC60Q8IWA6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 ZNF299P-201ENST00000406845 1804 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 RNU6-596P-201ENST00000365395 98 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 U8.10-201ENST00000384260 133 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.482-201ENST00000384377 111 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 RNU4-14P-201ENST00000410858 122 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 AC243428.1-201ENST00000421099 264 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 BX510359.4-201ENST00000423750 193 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 MTCO3P29-201ENST00000432119 779 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 AL353689.1-201ENST00000438895 199 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 AC004386.2-201ENST00000441858 148 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.635-201ENST00000459041 101 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.691-201ENST00000516611 103 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CCDC60Q8IWA6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AC008555.8-201ENST00000623602 2168 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 RNU1-76P-201ENST00000362903 159 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.99-201ENST00000363138 105 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 RNU6-1304P-201ENST00000411374 106 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AL353997.1-201ENST00000432936 108 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms