Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 Y_RNA.144-201ENST00000363521 113 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 Y_RNA.319-201ENST00000365138 92 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 Y_RNA.455-201ENST00000384230 98 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 MIR10B-201ENST00000385011 110 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 MIR153-2-201ENST00000385225 87 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 SNORA69.1-201ENST00000390904 137 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC007064.1-201ENST00000412238 351 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 RPS26P42-201ENST00000413485 326 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC003685.2-201ENST00000422795 395 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC063976.3-201ENST00000426849 329 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC010655.3-201ENST00000478818 450 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 ANXA2P1-201ENST00000505539 926 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC021269.2-201ENST00000532318 330 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 MIR4503-201ENST00000582187 83 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC125232.2-201ENST00000592457 143 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC046143.2-201ENST00000609789 160 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AC005520.5-201ENST00000613926 164 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 U2.1-201ENST00000618978 145 ntBASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.96□□□□□ -2.1
LRRTM1Q86UE6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 Y_RNA.39-201ENST00000362620 98 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 RNU6-806P-201ENST00000365147 105 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 RNU6-318P-201ENST00000384283 103 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 RNU6-505P-201ENST00000384427 107 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 MIR196B-201ENST00000384852 84 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 Y_RNA.597-201ENST00000410463 100 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 DPH3P2-201ENST00000422618 250 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AL590556.1-201ENST00000423231 483 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 EIF1P2-201ENST00000428233 350 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC107032.1-201ENST00000485945 480 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC132942.1-201ENST00000486753 483 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 RNU7-4P-201ENST00000516961 62 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC022868.1-201ENST00000517767 391 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC109329.2-201ENST00000519658 482 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC027176.1-201ENST00000560204 514 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC090617.3-201ENST00000573670 475 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AC124312.5-201ENST00000604451 268 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AL138963.2-201ENST00000605137 226 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AL033523.1-201ENST00000605153 153 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 ZNF204P-201ENST00000416749 2397 ntBASIC1.95□□□□□ -2.1
LRRTM1Q86UE6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 Y_RNA.47-201ENST00000362697 108 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 RNU1-23P-201ENST00000363361 144 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 RNU6-873P-201ENST00000363833 107 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 SNORA80A-201ENST00000363922 136 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 Y_RNA.222-201ENST00000364264 102 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 SNORD32B-201ENST00000364460 84 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 RNU6-159P-201ENST00000391080 106 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 RNU1-139P-201ENST00000391307 165 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 USP9YP16-201ENST00000430287 407 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 IPO7P1-201ENST00000442031 636 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 USP9YP23-201ENST00000455085 407 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 AC010469.2-201ENST00000496412 480 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 AC234781.5-201ENST00000508429 271 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 RNU6-397P-201ENST00000516226 104 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 RNU6-635P-201ENST00000516651 102 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 HSPE1P18-201ENST00000517602 280 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 AC131281.1-201ENST00000522984 164 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 AC040926.1-201ENST00000530195 238 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 GNAI2P1-201ENST00000541815 315 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 MIR5695-201ENST00000579717 85 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 7SK.7-201ENST00000603504 247 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 AL449363.1-201ENST00000617815 186 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 SCARNA15.3-201ENST00000626315 122 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 SCARNA4.1-201ENST00000628597 123 ntBASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LRRTM1Q86UE6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 AC062016.1-201ENST00000355719 319 ntBASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 RNU6-1301P-201ENST00000362724 104 ntBASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 U3.9-201ENST00000363823 204 ntBASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 SNORD115-8-201ENST00000363856 82 ntBASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 RNA5SP68-201ENST00000363885 119 ntBASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 Y_RNA.210-201ENST00000364161 110 ntBASIC1.93□□□□□ -2.1
LRRTM1Q86UE6 RNU4-56P-201ENST00000364700 142 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms