Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MICF-203ENST00000432679 129 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AC010095.1-201ENST00000443543 144 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RNU6-1132P-201ENST00000459214 107 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RN7SL429P-201ENST00000479090 223 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RPL26P26-201ENST00000480251 434 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RN7SL489P-201ENST00000486185 223 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RN7SL327P-201ENST00000488659 223 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RNU2-53P-201ENST00000516257 147 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 Y_RNA.680-201ENST00000516441 93 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RPPH1-2P-201ENST00000516688 293 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AC109329.2-201ENST00000519658 482 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AC090425.1-201ENST00000610007 140 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 PCGEM1.1-201ENST00000613431 131 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AL357075.2-201ENST00000614906 189 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 RN7SL853P-201ENST00000617250 223 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 LINC02555-201ENST00000563933 1951 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AC010615.1-201ENST00000594254 1764 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AL359854.1-201ENST00000614203 1594 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 AC135776.4-201ENST00000624300 1904 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 Z82195.2-201ENST00000612348 18351 ntBASIC2.23□□□□□ -2.05
C9orf139Q6ZV77 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 BX322639.1-202ENST00000423987 2213 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 RNU4-56P-201ENST00000364700 142 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 Y_RNA.518-201ENST00000384552 113 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 MIR196B-201ENST00000384852 84 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 SNORD88.1-201ENST00000408684 91 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 AC097463.2-201ENST00000421074 142 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 AC112220.1-201ENST00000434628 355 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 RPS3P1-201ENST00000456781 192 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 TRBVB-201ENST00000477100 408 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 AC103975.1-201ENST00000482506 483 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 MTND1P19-201ENST00000511780 315 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 Y_RNA.713-201ENST00000517013 96 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 MIR376A1-201ENST00000616574 68 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 MIR7157-201ENST00000635801 60 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 MIR7515-201ENST00000637837 67 ntBASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
C9orf139Q6ZV77 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 snoU2_19.1-201ENST00000362361 80 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RNU4-82P-201ENST00000362443 140 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RNU6-379P-201ENST00000363813 104 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RNU6-961P-201ENST00000363893 105 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RNU6-280P-201ENST00000364145 104 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RNU1-112P-201ENST00000364401 164 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RNA5SP126-201ENST00000365092 109 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 Y_RNA.447-201ENST00000384184 113 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RNU6-1203P-201ENST00000410703 110 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 EIF4EP4-201ENST00000424916 578 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 AC108059.2-201ENST00000434626 151 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 RN7SL499P-201ENST00000481141 276 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 AC145146.1-201ENST00000496370 254 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 AC096725.1-201ENST00000514266 313 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 SNORA25.14-201ENST00000516481 132 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 MZT1P2-201ENST00000604387 248 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 AC010999.1-201ENST00000611856 324 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 AP001282.2-201ENST00000616149 309 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 AC092593.1-201ENST00000515413 1815 ntBASIC2.21□□□□□ -2.06
C9orf139Q6ZV77 Y_RNA.14-201ENST00000362415 103 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 RNU6-461P-201ENST00000364195 107 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 RNU6-1318P-201ENST00000365389 103 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 Y_RNA.350-201ENST00000365409 98 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 Y_RNA.476-201ENST00000384347 108 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 RNU2-52P-201ENST00000410680 190 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 RNU6-1328P-201ENST00000410938 106 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 AC005002.2-201ENST00000438228 269 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 AL445687.1-201ENST00000439946 251 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 RNA5SP282-201ENST00000516355 108 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 SNORA9.3-201ENST00000516383 129 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 DEFB131C-201ENST00000528817 165 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 MIR4435-1-201ENST00000582552 80 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 MIR3605-201ENST00000583214 100 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 MIR4765-201ENST00000585007 77 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 ZNF861P-201ENST00000588126 639 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
C9orf139Q6ZV77 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.19□□□□□ -2.06
C9orf139Q6ZV77 Y_RNA.16-201ENST00000362421 102 ntBASIC2.19□□□□□ -2.06
C9orf139Q6ZV77 SNORD113-8-201ENST00000363497 74 ntBASIC2.19□□□□□ -2.06
C9orf139Q6ZV77 RNU1-109P-201ENST00000383960 147 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms