Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 MIR518A2-201ENST00000384966 87 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 SNORA75.6-201ENST00000391318 127 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 RNA5SP201-201ENST00000410316 124 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 AC012306.1-201ENST00000423267 114 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 MRPS18CP6-201ENST00000423587 223 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 AL445305.1-201ENST00000432577 575 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 AC027575.1-201ENST00000481064 460 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 AC022493.2-201ENST00000506122 481 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 MIR449C-201ENST00000516047 92 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 MIR5701-3-201ENST00000578890 82 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 MIR3124-201ENST00000582636 67 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 MIR5701-1-201ENST00000585138 82 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 MIR5701-2-201ENST00000615634 82 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 ZNF299P-201ENST00000406845 1804 ntBASIC1.94□□□□□ -2.1
CDHR3Q6ZTQ4 RNY1P16-201ENST00000363063 111 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.138-201ENST00000363462 102 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 RNY3P11-201ENST00000364153 102 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-99P-201ENST00000364721 107 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-142P-201ENST00000384019 107 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 U8.10-201ENST00000384260 133 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.561-201ENST00000384694 100 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 MIR1262-201ENST00000408276 93 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 TOMM22P6-201ENST00000465035 409 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AC021231.3-201ENST00000558497 370 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 MIR4287-201ENST00000579398 78 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 MIR1244-1-201ENST00000612829 85 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 MIR1244-3-201ENST00000635744 85 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 MIR1244-2-201ENST00000636449 85 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 MIR1244-4-202ENST00000636813 85 ntBASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.93□□□□□ -2.1
CDHR3Q6ZTQ4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 MIR369-201ENST00000362155 70 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 SNORA40.19-201ENST00000390846 128 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AL078595.1-201ENST00000404458 226 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 MIR1294-201ENST00000408503 142 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 CBX3P6-201ENST00000430257 527 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AC105758.1-201ENST00000506038 399 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-470P-201ENST00000515954 104 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AC018630.3-201ENST00000542637 96 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 MIR3136-201ENST00000583498 78 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AC080078.3-201ENST00000605407 463 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 AL355802.3-201ENST00000607571 545 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 SCARNA4-201ENST00000629045 128 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 MIR1248-201ENST00000629190 106 ntBASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDHR3Q6ZTQ4 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.31-201ENST00000362574 102 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-694P-201ENST00000364071 147 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 RNU4-56P-201ENST00000364700 142 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms