Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.82□□□□□ -1.8
TTC39BQ5VTQ0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC39BQ5VTQ0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.82□□□□□ -1.8
TTC39BQ5VTQ0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC39BQ5VTQ0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TTC39BQ5VTQ0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
TTC39BQ5VTQ0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 RNA5SP124-201ENST00000362739 110 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 Y_RNA.71-201ENST00000362892 104 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 HMGN2P31-201ENST00000432430 273 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AL121914.1-201ENST00000450188 156 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 SNORD105B-201ENST00000458770 79 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 RN7SKP18-201ENST00000516005 275 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 SNORA70.12-201ENST00000516084 153 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-561P-201ENST00000516222 102 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 RNU1-95P-201ENST00000516357 160 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 RNU1-128P-201ENST00000516704 160 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 MIR5688-201ENST00000580619 83 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 MIR3158-1-201ENST00000583596 81 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AC107294.3-201ENST00000609211 526 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AL391903.3-201ENST00000612158 163 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AC012442.3-202ENST00000636742 206 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 GABRG2-229ENST00000641017 3628 ntBASIC3.81□□□□□ -1.8
TTC39BQ5VTQ0 AP003122.5-201ENST00000527668 3766 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-199P-201ENST00000362954 107 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 Y_RNA.127-201ENST00000363386 109 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 Y_RNA.229-201ENST00000364347 113 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 SNORD32B-201ENST00000364460 84 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 U8.7-201ENST00000364940 136 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 SNORA5A-201ENST00000384111 134 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 Y_RNA.542-201ENST00000384641 111 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 MIR200C-201ENST00000384980 68 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 MIR586-201ENST00000385035 97 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 MIR1185-2-201ENST00000408687 86 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 AC002075.2-201ENST00000425207 252 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 AC114982.1-201ENST00000469402 321 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 SNORA67.7-201ENST00000516664 135 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 AC026403.1-201ENST00000518938 295 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 MIR4429-201ENST00000580105 73 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 uc_338.14-201ENST00000613162 166 ntBASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.8□□□□□ -1.8
TTC39BQ5VTQ0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 SNORA51.4-201ENST00000364993 124 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 Y_RNA.353-201ENST00000365440 108 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 YME1L1P1-201ENST00000429435 297 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 RPS29P31-201ENST00000446147 164 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-1211P-201ENST00000459179 105 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 RPS29P2-201ENST00000479278 136 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 AC006445.1-201ENST00000491925 405 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-1333P-201ENST00000516162 93 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-1234P-201ENST00000516877 103 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 AC112693.2-201ENST00000556538 232 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 MIR4724-201ENST00000579485 89 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 RPL17P51-201ENST00000605218 238 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 AC012640.5-201ENST00000623897 319 ntBASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.79□□□□□ -1.8
TTC39BQ5VTQ0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 Y_RNA.124-201ENST00000363339 93 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-407P-201ENST00000365280 104 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 AP002088.1-201ENST00000382740 395 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-144P-201ENST00000383951 107 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 Y_RNA.420-201ENST00000384043 110 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 MIR15B-201ENST00000385045 98 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 AL606845.1-201ENST00000404881 255 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RNU6-383P-201ENST00000410864 94 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RNU7-197P-201ENST00000458836 62 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TTC39BQ5VTQ0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms