Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL359697.1-201ENST00000624879 587 ntBASIC-0.54□□□□□ -2.5
CCDC58Q4VC31 SNORD118-201ENST00000363593 134 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 RNU6-692P-201ENST00000384496 107 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 MIR1284-201ENST00000408337 120 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 RNU2-62P-201ENST00000410868 191 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 MTND3P17-201ENST00000416968 344 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 AC004854.1-201ENST00000440356 349 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 MIR3612-201ENST00000579753 87 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 Z99289.3-201ENST00000605586 594 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 SNORA25.18-201ENST00000607153 114 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 AC122133.1-201ENST00000613964 233 ntBASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.55□□□□□ -2.5
CCDC58Q4VC31 RNY3P13-201ENST00000365542 102 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 MIR610-201ENST00000385139 96 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 RNU6-747P-201ENST00000390928 104 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 RNU6-241P-201ENST00000391148 104 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 SCARNA8-201ENST00000515924 131 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 RNU6-567P-201ENST00000516746 107 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 AC092447.9-201ENST00000603395 144 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 AP002360.4-201ENST00000606980 481 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 AL450472.1-202ENST00000637286 180 ntBASIC-0.56□□□□□ -2.5
CCDC58Q4VC31 RNU6-552P-201ENST00000362869 119 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 U3.4-201ENST00000363352 213 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 RNU6-236P-201ENST00000363886 106 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 RNA5SP275-201ENST00000363936 118 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 RNU6-293P-201ENST00000411259 106 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 RPS3AP3-201ENST00000411933 242 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC019070.1-201ENST00000415008 1024 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 CALM2P4-201ENST00000430810 426 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC093850.1-201ENST00000454121 251 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC016632.1-201ENST00000503994 196 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC092436.3-201ENST00000511788 257 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 7SK.7-201ENST00000603504 247 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC104695.3-201ENST00000604052 296 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC092574.1-201ENST00000609771 420 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AP000943.4-201ENST00000622912 357 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 AC011155.2-201ENST00000623202 216 ntBASIC-0.57□□□□□ -2.5
CCDC58Q4VC31 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 RNU6-833P-201ENST00000363486 107 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 SNORD32A-201ENST00000364805 84 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 RNU6-468P-201ENST00000384003 109 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 MIR208B-201ENST00000401172 77 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 SNORD83.1-201ENST00000411362 77 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 AC106883.1-201ENST00000418805 562 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 SNORD4A-201ENST00000459174 72 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 RNU1-117P-201ENST00000517041 158 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 DEFB131C-201ENST00000528817 165 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 AC097460.3-201ENST00000623099 442 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 AP002782.1-201ENST00000623107 614 ntBASIC-0.58□□□□□ -2.5
CCDC58Q4VC31 SNORD113.3-201ENST00000364630 78 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 MIR593-201ENST00000384856 100 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 RNU6-679P-201ENST00000391003 106 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 U8.16-201ENST00000391279 133 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 AC096531.1-201ENST00000419107 107 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 AL133396.1-201ENST00000432048 687 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 AP000870.1-201ENST00000472927 406 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 RN7SKP287-201ENST00000516546 266 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 AL158032.1-201ENST00000605401 106 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 MIR8076-201ENST00000611401 83 ntBASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.59□□□□□ -2.5
CCDC58Q4VC31 SNORA9.1-201ENST00000362412 131 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 snoZ40.1-201ENST00000364540 72 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 SNORA1.1-201ENST00000364671 133 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 MIR106A-201ENST00000384870 81 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 HMGN1P10-201ENST00000474557 553 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 DEFB130C-202ENST00000530001 230 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 MIR5697-201ENST00000578045 78 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 AL158042.1-201ENST00000605338 460 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 uc_338.16-201ENST00000621804 95 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 AC067863.3-201ENST00000624172 122 ntBASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCDC58Q4VC31 SNORA25.3-201ENST00000363205 127 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 AC016909.1-201ENST00000415916 166 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms