| CRY2 | Q49AN0 | RNA5SP454-201 | ENST00000517231 | 127 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC087518.1-201 | ENST00000524098 | 187 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC025030.2-201 | ENST00000552558 | 567 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL049869.2-201 | ENST00000556634 | 365 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNRPGP20-201 | ENST00000604477 | 205 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RMST_6.1-201 | ENST00000611980 | 203 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | TCL6_2.1-201 | ENST00000615162 | 119 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC006026.1-201 | ENST00000444025 | 1803 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORD50.1-201 | ENST00000362987 | 71 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORD48-201 | ENST00000364953 | 64 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.508-201 | ENST00000384502 | 114 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-306P-201 | ENST00000384617 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNA5SP212-201 | ENST00000391223 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.619-201 | ENST00000410951 | 90 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC007395.1-201 | ENST00000451333 | 677 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | LEKR1-205 | ENST00000477399 | 621 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | LINC02061-201 | ENST00000514225 | 335 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORA59B-202 | ENST00000578183 | 701 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | ZFAT-AS1_2.1-201 | ENST00000613742 | 201 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC009248.2-201 | ENST00000619826 | 254 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL359697.1-201 | ENST00000624879 | 587 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL591030.1-201 | ENST00000626131 | 627 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL807742.1-203 | ENST00000637444 | 759 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | ATP11C-202 | ENST00000361648 | 6010 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MTND5P9-201 | ENST00000503854 | 1755 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MBNL3-212 | ENST00000538204 | 11294 nt | TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU1-42P-201 | ENST00000364033 | 160 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU4-9P-201 | ENST00000364951 | 139 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR300-201 | ENST00000401138 | 83 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNA5SP501-201 | ENST00000410990 | 112 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | EIF4EP2-201 | ENST00000422816 | 654 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | PPP1R2P5-201 | ENST00000457256 | 603 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL121821.1-201 | ENST00000557067 | 530 nt | TSL 3 BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR4790-201 | ENST00000577799 | 79 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR4299-201 | ENST00000577899 | 72 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR3618-201 | ENST00000580330 | 88 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR4753-201 | ENST00000585119 | 83 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | BX248123.2-201 | ENST00000606318 | 124 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL589935.1-202 | ENST00000612512 | 393 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR6128-201 | ENST00000615528 | 109 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | 5S_rRNA.11-201 | ENST00000618635 | 84 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | PRPSAP2-229 | ENST00000628609 | 192 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | E2F5-208 | ENST00000521429 | 1551 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | CYLC2-204 | ENST00000612124 | 1817 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC008163.1-205 | ENST00000413944 | 4649 nt | TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SLCO1B3-202 | ENST00000381545 | 2805 nt | APPRIS P1 TSL 2 BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SKIL-202 | ENST00000413427 | 2702 nt | TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | FSD1L-201 | ENST00000374707 | 7062 nt | TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-545P-201 | ENST00000362681 | 104 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.355-201 | ENST00000365462 | 98 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR32-201 | ENST00000384965 | 70 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR549A-201 | ENST00000385268 | 96 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR676-201 | ENST00000390702 | 67 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORA12.2-201 | ENST00000391040 | 156 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL356432.1-201 | ENST00000405809 | 419 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SUMO2P12-201 | ENST00000405924 | 140 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNA5SP489-201 | ENST00000410986 | 109 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MRLN-201 | ENST00000414264 | 422 nt | APPRIS P2 TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AP000235.1-201 | ENST00000424017 | 479 nt | TSL 3 BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MTATP6P13-201 | ENST00000438531 | 667 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC016925.1-201 | ENST00000458303 | 298 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU1-131P-201 | ENST00000458943 | 161 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MTND4LP26-201 | ENST00000518144 | 282 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORD53B-201 | ENST00000577887 | 78 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR3169-201 | ENST00000578032 | 83 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR3935-201 | ENST00000583472 | 104 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | B3GNTL1P2-201 | ENST00000603673 | 288 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC092794.1-201 | ENST00000612734 | 582 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | ZRANB2-AS2-222 | ENST00000625045 | 1014 nt | TSL 5 BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SCARNA4-201 | ENST00000629045 | 128 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MTND4P5-201 | ENST00000435821 | 1374 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | VPS13A-206 | ENST00000376646 | 2262 nt | TSL 5 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AGR3-201 | ENST00000310398 | 749 nt | APPRIS P1 TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.327-201 | ENST00000365201 | 102 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | FAM206A-202 | ENST00000374624 | 499 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC244636.1-201 | ENST00000421152 | 228 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | HMGN2P19-201 | ENST00000425149 | 265 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL132875.2-201 | ENST00000436418 | 325 nt | TSL 5 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC015983.2-201 | ENST00000446053 | 472 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | ZEB1-AS1-204 | ENST00000450834 | 576 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC079354.2-201 | ENST00000453523 | 154 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC007215.1-201 | ENST00000464893 | 276 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC008852.1-201 | ENST00000510198 | 451 nt | TSL 2 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.682-201 | ENST00000516457 | 100 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-1198P-201 | ENST00000516904 | 67 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | HMSD-204 | ENST00000526932 | 162 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL035078.1-202 | ENST00000531627 | 413 nt | TSL 2 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC011939.2-201 | ENST00000567396 | 428 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC011712.1-201 | ENST00000588959 | 234 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | DLEU2_5.1-201 | ENST00000615567 | 84 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | TEX15-203 | ENST00000638951 | 11341 nt | APPRIS P1 TSL 5 BASIC | 1.98 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 1.98 | □□□□□ -2.09 | | |