Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 Z99497.2-201ENST00000603634 310 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC064872.1-201ENST00000604823 1072 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AL158042.1-201ENST00000605338 460 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 Z99289.3-201ENST00000605586 594 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC097478.2-201ENST00000610572 514 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC019226.2-201ENST00000625973 424 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 RNU6-428P-201ENST00000362942 107 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 RNU6-199P-201ENST00000362954 107 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 RNU6-39P-201ENST00000384344 107 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 SNORA16.2-201ENST00000390991 127 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 MRPL42P2-201ENST00000403169 426 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC012306.1-201ENST00000423267 114 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 MED13P1-201ENST00000428342 171 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 TIMM9P3-201ENST00000428659 274 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC022364.2-201ENST00000457963 554 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 SNORA31.10-201ENST00000516482 106 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC023050.3-201ENST00000541142 333 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC090049.2-201ENST00000550377 109 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 MIR4802-201ENST00000581881 80 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC080078.2-201ENST00000603766 501 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC104458.1-201ENST00000608243 463 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC005520.5-201ENST00000613926 164 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC093913.1-201ENST00000614178 329 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
RFX7Q2KHR2 AC073349.3-201ENST00000617616 186 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 MIR8054-201ENST00000620877 86 ntBASIC0.19□□□□□ -2.38
RFX7Q2KHR2 RNU6-179P-201ENST00000363350 107 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 RNU6-116P-201ENST00000384042 109 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 RNU6-809P-201ENST00000384461 107 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 RNU6-440P-201ENST00000390882 105 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC007283.2-201ENST00000424739 197 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AL049830.1-201ENST00000468034 425 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC008628.2-201ENST00000502605 298 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC010486.2-201ENST00000505572 483 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC010587.1-201ENST00000505809 469 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC104136.1-201ENST00000512969 394 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.18□□□□□ -2.38
RFX7Q2KHR2 RN7SKP12-201ENST00000516275 143 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 MTND4LP18-201ENST00000526864 291 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.18□□□□□ -2.38
RFX7Q2KHR2 AL162424.1-201ENST00000602325 221 ntBASIC0.18□□□□□ -2.38
RFX7Q2KHR2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
RFX7Q2KHR2 Y_RNA.287-201ENST00000364853 94 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 RNU6-61P-201ENST00000365528 109 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 RNU6-975P-201ENST00000384296 105 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 MIR558-201ENST00000384920 94 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 MIR660-201ENST00000385235 97 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 MIR549A-201ENST00000385268 96 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 MIR653-201ENST00000385279 96 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 SNORD89-201ENST00000390981 114 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 ELOCP4-201ENST00000420090 333 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AC245047.3-201ENST00000429428 127 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 RPL37P21-201ENST00000435890 276 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AL606517.2-201ENST00000442855 241 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AL031313.1-201ENST00000448435 256 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 U7.7-201ENST00000459276 60 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 MTCO2P29-201ENST00000465212 189 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AC112204.1-201ENST00000502591 103 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AC025465.4-201ENST00000513422 638 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 RNU6-1069P-201ENST00000516612 133 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.17□□□□□ -2.38
RFX7Q2KHR2 MIR4778-201ENST00000577635 80 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AC091805.2-201ENST00000603848 235 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AC080013.3-201ENST00000606839 578 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AL359075.3-201ENST00000613288 217 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 AP000484.1-201ENST00000620067 1252 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 7SK.10-201ENST00000621414 298 ntBASIC0.17□□□□□ -2.38
RFX7Q2KHR2 RNU4-48P-201ENST00000365559 182 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 SNORA36.2-201ENST00000384004 127 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 RNU6-163P-201ENST00000384396 106 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 SNORD41-201ENST00000386967 70 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 RNU1-119P-201ENST00000391122 165 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 SNORA75.2-201ENST00000391138 150 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 SNORA75.3-201ENST00000391231 150 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 MRPL42P3-201ENST00000401492 326 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.16□□□□□ -2.38
RFX7Q2KHR2 AC013470.1-201ENST00000453438 462 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.16□□□□□ -2.38
RFX7Q2KHR2 RNU6-685P-201ENST00000517088 95 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.16□□□□□ -2.38
RFX7Q2KHR2 MIR5006-201ENST00000583027 110 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 BNIP3P40-201ENST00000596017 556 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 AL390123.1-201ENST00000603216 237 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 MTND3P19-201ENST00000603825 345 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 AL158211.2-201ENST00000607282 395 ntBASIC0.16□□□□□ -2.38
RFX7Q2KHR2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.16□□□□□ -2.38
RFX7Q2KHR2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.16□□□□□ -2.38
RFX7Q2KHR2 Y_RNA.60-201ENST00000362831 98 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 SNORA36A-201ENST00000384221 132 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 RPS29P13-201ENST00000402041 169 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms