Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC116165.2-201ENST00000616705 206 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC008993.2-201ENST00000631744 806 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.18□□□□□ -2.38
CACNA1EQ15878 ZNF204P-201ENST00000416749 2397 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC023934.1-201ENST00000574529 2389 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CACNA1EQ15878 RNA5SP98-201ENST00000363158 137 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RNU6-1285P-201ENST00000363480 105 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 SNORD32B-201ENST00000364460 84 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 Y_RNA.287-201ENST00000364853 94 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RNU6-1029P-201ENST00000384109 107 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RNU6-125P-201ENST00000384505 107 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RNU6-296P-201ENST00000384608 107 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 ELOCP4-201ENST00000420090 333 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 USP9YP28-201ENST00000435142 589 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 EXOSC3P1-201ENST00000448649 500 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC233266.1-201ENST00000454518 96 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC091951.3-201ENST00000504093 246 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.18□□□□□ -2.38
CACNA1EQ15878 AC242852.1-201ENST00000612151 96 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 RMST_7.1-201ENST00000621935 268 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 OR5AK4P-201ENST00000635912 903 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 U6.108-201ENST00000637764 58 ntBASIC0.18□□□□□ -2.38
CACNA1EQ15878 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU6-369P-201ENST00000362515 102 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU5B-2P-201ENST00000363036 113 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 SNORD56.2-201ENST00000363242 71 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU6-727P-201ENST00000363592 107 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU6-1141P-201ENST00000364520 107 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU6-46P-201ENST00000383860 107 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 SNORA32.3-201ENST00000384772 121 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 Y_RNA.576-201ENST00000384781 102 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MIR520G-201ENST00000385064 90 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MIR520H-201ENST00000385126 88 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MIR140-201ENST00000385282 100 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 SNORD73A-201ENST00000386062 65 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU6-903P-201ENST00000391270 109 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MTCO3P41-201ENST00000414801 328 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.17□□□□□ -2.38
CACNA1EQ15878 SNX2P2-201ENST00000424553 323 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AL356583.2-201ENST00000426536 280 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.17□□□□□ -2.38
CACNA1EQ15878 AC009237.7-201ENST00000447357 229 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AC016717.1-201ENST00000448918 286 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU7-182P-201ENST00000459009 62 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.17□□□□□ -2.38
CACNA1EQ15878 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.17□□□□□ -2.38
CACNA1EQ15878 RNU6-123P-201ENST00000516163 102 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AC018659.1-201ENST00000551083 169 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MIR4709-201ENST00000577272 72 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.17□□□□□ -2.38
CACNA1EQ15878 MIR4753-201ENST00000585119 83 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AP001596.2-201ENST00000608410 312 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AL353149.1-201ENST00000610667 244 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AC007014.2-201ENST00000615581 479 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 AC068137.4-201ENST00000638485 296 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MTND4P5-201ENST00000435821 1374 ntBASIC0.17□□□□□ -2.38
CACNA1EQ15878 MIR103A2-201ENST00000362154 78 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 SNORD114-19-201ENST00000363072 75 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU6-393P-201ENST00000384475 107 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU6-83P-201ENST00000384568 112 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 SNORA2B-201ENST00000384583 137 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU6-1257P-201ENST00000384625 110 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 MIR200A-201ENST00000384875 90 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC011233.1-201ENST00000422812 283 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC010154.1-201ENST00000425857 269 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RPL23AP50-201ENST00000434149 455 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC002350.1-201ENST00000490759 375 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 HMGB1P29-201ENST00000505659 499 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC087883.1-201ENST00000551882 391 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 UBL5P4-201ENST00000562584 236 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.16□□□□□ -2.38
CACNA1EQ15878 AL929325.1-201ENST00000603096 117 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC016597.2-201ENST00000613256 341 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 AC022418.1-201ENST00000624118 445 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU5F-6P-201ENST00000362979 116 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 Y_RNA.97-201ENST00000363094 102 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU6-137P-201ENST00000363680 108 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 Y_RNA.367-201ENST00000365544 101 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU6-827P-201ENST00000365553 106 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 Y_RNA.381-201ENST00000365666 102 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU6-378P-201ENST00000384324 107 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 Y_RNA.495-201ENST00000384435 112 ntBASIC0.16□□□□□ -2.38
CACNA1EQ15878 RNU6-45P-201ENST00000384471 107 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms