Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SNORD78.2-201ENST00000391076 69 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 RNA5SP390-201ENST00000410191 113 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 AC078809.1-201ENST00000427601 140 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 GPM6BP3-201ENST00000442797 145 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 snoU13.26-201ENST00000459452 105 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 RN7SL297P-201ENST00000483161 293 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 AC016632.1-201ENST00000503994 196 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.01□□□□□ -1.93
SF3B3Q15393 RNU5F-8P-201ENST00000515941 111 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.01□□□□□ -1.93
SF3B3Q15393 AC093023.1-201ENST00000547375 507 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 AC027288.2-201ENST00000553028 243 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 MIR4648-201ENST00000580107 72 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.01□□□□□ -1.93
SF3B3Q15393 AC090897.2-201ENST00000581715 130 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 AC090616.3-201ENST00000582184 217 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 AC012433.1-201ENST00000588916 398 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 MIR376A1-201ENST00000616574 68 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 MIR3199-2-201ENST00000636243 86 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SF3B3Q15393 AC069528.2-201ENST00000624849 1991 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SF3B3Q15393 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SF3B3Q15393 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SF3B3Q15393 MIR767-201ENST00000390228 109 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AL079342.1-201ENST00000401460 267 ntBASIC3□□□□□ -1.93
SF3B3Q15393 SNORD88.1-201ENST00000408684 91 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AC007064.1-201ENST00000412238 351 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AC009310.1-201ENST00000414414 451 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AL161651.1-201ENST00000440882 223 ntBASIC3□□□□□ -1.93
SF3B3Q15393 RPL39P40-201ENST00000445481 146 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AC104389.3-201ENST00000445629 235 ntBASIC3□□□□□ -1.93
SF3B3Q15393 MTND4LP30-201ENST00000454092 297 ntBASIC3□□□□□ -1.93
SF3B3Q15393 SNRPGP7-201ENST00000469016 106 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3□□□□□ -1.93
SF3B3Q15393 RNU6-1114P-201ENST00000516022 107 ntBASIC3□□□□□ -1.93
SF3B3Q15393 MIR4659A-201ENST00000580269 81 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AC073410.2-201ENST00000603240 332 ntBASIC3□□□□□ -1.93
SF3B3Q15393 Y_RNA.772-201ENST00000606692 102 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AC141273.2-201ENST00000618989 130 ntBASIC3□□□□□ -1.93
SF3B3Q15393 AC137590.2-201ENST00000619709 240 ntBASIC3□□□□□ -1.93
SF3B3Q15393 RBBP8P1-201ENST00000449447 1844 ntBASIC3□□□□□ -1.93
SF3B3Q15393 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SF3B3Q15393 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.99□□□□□ -1.93
SF3B3Q15393 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.99□□□□□ -1.93
SF3B3Q15393 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
SF3B3Q15393 AC092268.1-201ENST00000342691 405 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 RNU6-1285P-201ENST00000363480 105 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 Y_RNA.143-201ENST00000363520 106 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 RNU6-137P-201ENST00000363680 108 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 SNORA36A-201ENST00000384221 132 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 SNORA26.3-201ENST00000391119 136 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.99□□□□□ -1.93
SF3B3Q15393 RPS15AP7-201ENST00000439294 405 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.99□□□□□ -1.93
SF3B3Q15393 AC096638.1-201ENST00000444678 216 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 RPL39P29-201ENST00000447779 157 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.99□□□□□ -1.93
SF3B3Q15393 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 AC026436.1-201ENST00000510537 270 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
SF3B3Q15393 AC021269.2-201ENST00000532318 330 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 AC011373.1-201ENST00000607270 237 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 AC135776.4-201ENST00000624300 1904 ntBASIC2.99□□□□□ -1.93
SF3B3Q15393 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SF3B3Q15393 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SF3B3Q15393 MIR335-201ENST00000362173 94 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 SNORA20.1-201ENST00000364790 130 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 Y_RNA.319-201ENST00000365138 92 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 Y_RNA.477-201ENST00000384352 108 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 Y_RNA.478-201ENST00000384358 107 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 MIR487A-201ENST00000385009 80 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 MIR10B-201ENST00000385011 110 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 MRPL35P1-201ENST00000404272 572 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 AC096920.1-201ENST00000423991 241 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 RPS15AP5-201ENST00000436276 388 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 AC244670.1-201ENST00000436879 112 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 RNU7-23P-201ENST00000459465 62 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.98□□□□□ -1.93
SF3B3Q15393 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.98□□□□□ -1.93
SF3B3Q15393 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 SNORD19.2-201ENST00000516978 73 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 AC021231.3-201ENST00000558497 370 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 AC023824.2-201ENST00000566185 400 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 MIR1273D-201ENST00000577266 86 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 AC091152.3-201ENST00000604227 325 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 AL359198.2-201ENST00000611836 194 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 AC011476.5-201ENST00000615594 130 ntBASIC2.98□□□□□ -1.93
SF3B3Q15393 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.98□□□□□ -1.93
SF3B3Q15393 SNORD81.1-201ENST00000363064 77 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 SNORD115-8-201ENST00000363856 82 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 SNORD115-38-201ENST00000365037 82 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 Y_RNA.581-201ENST00000391017 97 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.97□□□□□ -1.93
SF3B3Q15393 AC012308.1-201ENST00000451232 178 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms