Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MIR4293-201ENST00000584305 78 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AC234772.3-201ENST00000602277 528 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RPL17P51-201ENST00000605218 238 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AL031667.3-201ENST00000620124 655 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AL157770.1-201ENST00000623049 439 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 AC112204.3-201ENST00000623822 332 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 MIR6079-201ENST00000635807 62 ntBASIC-0.38□□□□□ -2.47
HMGXB3Q12766 RNA5SP275-201ENST00000363936 118 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 RNA5SP517-201ENST00000364724 117 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 MIR573-201ENST00000384964 99 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.39□□□□□ -2.47
HMGXB3Q12766 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.39□□□□□ -2.47
HMGXB3Q12766 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 RN7SKP287-201ENST00000516546 266 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.39□□□□□ -2.47
HMGXB3Q12766 MIR4441-201ENST00000582623 100 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 AC104695.3-201ENST00000604052 296 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 AC022893.3-201ENST00000607665 437 ntBASIC-0.39□□□□□ -2.47
HMGXB3Q12766 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.39□□□□□ -2.47
HMGXB3Q12766 BX322639.1-202ENST00000423987 2213 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 RNU4-56P-201ENST00000364700 142 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 MIR19A-201ENST00000384878 82 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 MTCYBP2-201ENST00000407745 171 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.4□□□□□ -2.47
HMGXB3Q12766 MTCYBP39-201ENST00000437562 491 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC007969.2-201ENST00000441891 191 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AL139824.2-201ENST00000458731 1095 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 SNORD4A-201ENST00000459174 72 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 RPS23P5-201ENST00000495419 428 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC010469.2-201ENST00000496412 480 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC113347.3-201ENST00000509113 148 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.4□□□□□ -2.47
HMGXB3Q12766 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AL162424.1-201ENST00000602325 221 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AL138889.2-201ENST00000603883 242 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.4□□□□□ -2.47
HMGXB3Q12766 U6.42-201ENST00000618440 107 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 MIR8054-201ENST00000620877 86 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 AC231657.1-201ENST00000624313 397 ntBASIC-0.4□□□□□ -2.47
HMGXB3Q12766 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 SNORA18.1-201ENST00000363418 128 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 RNU6-744P-201ENST00000365557 107 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 MIR10A-201ENST00000385043 110 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
HMGXB3Q12766 AC093899.1-201ENST00000457984 376 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 AC109445.1-201ENST00000512356 383 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 RNU6-917P-201ENST00000516294 104 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGXB3Q12766 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGXB3Q12766 MIR4300-201ENST00000581016 96 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 AC110760.3-201ENST00000598794 467 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 AC007014.2-201ENST00000615581 479 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 uc_338.36-201ENST00000622331 158 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 SNORD98-201ENST00000636377 67 ntBASIC-0.41□□□□□ -2.48
HMGXB3Q12766 RNY4P7-201ENST00000364600 96 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
HMGXB3Q12766 SNORD75.1-201ENST00000408373 60 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 AL606517.2-201ENST00000442855 241 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 MTCO2P7-201ENST00000446518 666 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 AL163973.1-201ENST00000484753 577 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 AC114811.1-201ENST00000507207 168 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 MTCO3P42-201ENST00000509488 518 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 MTCO3P39-201ENST00000514812 518 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 RNU2-34P-201ENST00000516534 121 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGXB3Q12766 LRRC6P1-201ENST00000532188 885 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 AL096861.1-201ENST00000610899 123 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 MIR8076-201ENST00000611401 83 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.42□□□□□ -2.48
HMGXB3Q12766 MIR1-1-201ENST00000362147 71 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 RNU6-440P-201ENST00000390882 105 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 RNU6-747P-201ENST00000390928 104 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 RNU6-241P-201ENST00000391148 104 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 RNU2-42P-201ENST00000410697 113 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 RNU4-22P-201ENST00000411058 166 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 AC016909.1-201ENST00000415916 166 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.43□□□□□ -2.48
HMGXB3Q12766 AL590623.1-201ENST00000427864 105 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.43□□□□□ -2.48
HMGXB3Q12766 TPT1P7-201ENST00000458300 517 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.43□□□□□ -2.48
HMGXB3Q12766 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.43□□□□□ -2.48
HMGXB3Q12766 AC105185.1-201ENST00000518705 535 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 AC023157.2-201ENST00000540596 141 ntBASIC-0.43□□□□□ -2.48
HMGXB3Q12766 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms