Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
IRF9Q00978 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
IRF9Q00978 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
IRF9Q00978 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.05□□□□□ -1.92
IRF9Q00978 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.05□□□□□ -1.92
IRF9Q00978 MAPK10-362ENST00000641864 4484 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 SNORD21-201ENST00000383953 95 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 MIR1289-1-201ENST00000408836 144 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 RNU6-1199P-201ENST00000411249 104 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 TOMM22P2-201ENST00000430735 237 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 AL353705.1-201ENST00000433468 480 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 NDUFB4P10-201ENST00000452541 359 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.05□□□□□ -1.92
IRF9Q00978 AC091959.1-201ENST00000495857 238 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.05□□□□□ -1.92
IRF9Q00978 MIR449C-201ENST00000516047 92 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.05□□□□□ -1.92
IRF9Q00978 AC006380.1-201ENST00000603598 186 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 AC099778.2-201ENST00000610904 211 ntBASIC3.05□□□□□ -1.92
IRF9Q00978 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.05□□□□□ -1.92
IRF9Q00978 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
IRF9Q00978 AC073325.2-201ENST00000339545 159 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 U3.8-201ENST00000363675 217 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 RNU6-454P-201ENST00000364292 107 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 Y_RNA.275-201ENST00000364726 110 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 MIR586-201ENST00000385035 97 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 AC080013.2-201ENST00000460866 323 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 AC090515.1-201ENST00000465295 476 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 RPS29P26-201ENST00000477483 171 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 RNU2-12P-201ENST00000517216 168 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 SNORA70.24-201ENST00000517233 118 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.04□□□□□ -1.92
IRF9Q00978 AC018630.3-201ENST00000542637 96 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 AC130289.1-201ENST00000577321 73 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 UBL5P2-201ENST00000583788 219 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 AL162424.1-201ENST00000602325 221 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
IRF9Q00978 Z82209.1-201ENST00000422141 2135 ntBASIC3.04□□□□□ -1.92
IRF9Q00978 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
IRF9Q00978 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
IRF9Q00978 UBE2WP1-201ENST00000362030 340 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 RNU6-1305P-201ENST00000364353 104 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 FO393413.1-201ENST00000402892 195 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 RNU2-64P-201ENST00000411315 191 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 RN7SL863P-201ENST00000462370 296 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 RN7SL601P-201ENST00000471221 293 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 HMGN2P9-201ENST00000476875 229 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.03□□□□□ -1.92
IRF9Q00978 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.03□□□□□ -1.92
IRF9Q00978 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
IRF9Q00978 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 AC022080.3-201ENST00000544433 482 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 RPL21P9-201ENST00000556149 474 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.03□□□□□ -1.92
IRF9Q00978 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.03□□□□□ -1.92
IRF9Q00978 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
IRF9Q00978 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
IRF9Q00978 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.03□□□□□ -1.93
IRF9Q00978 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.02□□□□□ -1.93
IRF9Q00978 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
IRF9Q00978 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.02□□□□□ -1.93
IRF9Q00978 RNU6-740P-201ENST00000364734 105 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 RNA5SP267-201ENST00000364893 126 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 RNU6-234P-201ENST00000365229 104 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 MIR491-201ENST00000384877 84 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 MIR548B-201ENST00000385247 97 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 AC009310.1-201ENST00000414414 451 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.02□□□□□ -1.93
IRF9Q00978 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.02□□□□□ -1.93
IRF9Q00978 AC009969.1-201ENST00000438726 172 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 RNU7-14P-201ENST00000459331 62 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 AC023141.11-201ENST00000508864 202 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 SNORA27.4-201ENST00000516650 95 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.02□□□□□ -1.93
IRF9Q00978 MIR3145-201ENST00000580727 82 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 AL512605.2-201ENST00000592972 256 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 MIR5739-201ENST00000619803 80 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 AC007318.2-201ENST00000620999 243 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 SNORA50A-202ENST00000629536 136 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
IRF9Q00978 AC073346.2-201ENST00000624724 2058 ntBASIC3.02□□□□□ -1.93
IRF9Q00978 AC008264.2-201ENST00000610193 3731 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.01□□□□□ -1.93
IRF9Q00978 Y_RNA.76-201ENST00000362931 109 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 RNU4-80P-201ENST00000363200 141 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 Y_RNA.200-201ENST00000364018 102 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 SNORA51.4-201ENST00000364993 124 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 SNORA7.4-201ENST00000384249 137 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 AL139156.1-201ENST00000412785 841 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 BX510359.1-201ENST00000456973 237 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 RN7SL633P-201ENST00000488974 297 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 SRIP1-201ENST00000489235 288 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 DEFB117-201ENST00000602356 141 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 AC091953.5-201ENST00000622919 233 ntBASIC3.01□□□□□ -1.93
IRF9Q00978 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
IRF9Q00978 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
IRF9Q00978 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms