Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RNU2-1-201ENST00000618664 191 ntBASIC2.03□□□□□ -2.08
CDK3Q00526 U2.6-201ENST00000619225 191 ntBASIC2.03□□□□□ -2.08
CDK3Q00526 U2.5-201ENST00000619465 191 ntBASIC2.03□□□□□ -2.08
CDK3Q00526 U2.10-201ENST00000620268 191 ntBASIC2.03□□□□□ -2.08
CDK3Q00526 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.03□□□□□ -2.08
CDK3Q00526 MTND4LP32-201ENST00000636111 270 ntBASIC2.03□□□□□ -2.08
CDK3Q00526 AC005336.3-201ENST00000623833 2679 ntBASIC2.03□□□□□ -2.09
CDK3Q00526 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CDK3Q00526 RNU6-1164P-201ENST00000364428 107 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
CDK3Q00526 AC123900.1-201ENST00000420390 96 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.02□□□□□ -2.09
CDK3Q00526 BX510359.4-201ENST00000423750 193 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC009237.7-201ENST00000447357 229 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.02□□□□□ -2.09
CDK3Q00526 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.02□□□□□ -2.09
CDK3Q00526 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.02□□□□□ -2.09
CDK3Q00526 AP000870.1-201ENST00000472927 406 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC097473.1-201ENST00000508142 408 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.02□□□□□ -2.09
CDK3Q00526 IGLV3-17-201ENST00000519099 244 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.02□□□□□ -2.09
CDK3Q00526 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.02□□□□□ -2.09
CDK3Q00526 UBL5P4-201ENST00000562584 236 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 MIR5701-3-201ENST00000578890 82 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 MIR5701-1-201ENST00000585138 82 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
CDK3Q00526 MIR5701-2-201ENST00000615634 82 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.02□□□□□ -2.09
CDK3Q00526 AC130454.1-201ENST00000622948 401 ntBASIC2.02□□□□□ -2.09
CDK3Q00526 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.02□□□□□ -2.09
CDK3Q00526 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.02□□□□□ -2.09
CDK3Q00526 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.01□□□□□ -2.09
CDK3Q00526 ZNF720P1-201ENST00000562403 1939 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDK3Q00526 RNU6-137P-201ENST00000363680 108 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 RNU6-873P-201ENST00000363833 107 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 Y_RNA.259-201ENST00000364619 101 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 RNU6-160P-201ENST00000384591 107 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 MTCYBP10-201ENST00000424905 650 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 MTND3P23-201ENST00000431980 347 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 AC016925.1-201ENST00000458303 298 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 Y_RNA.653-201ENST00000459091 95 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 FGF7P4-201ENST00000509595 295 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 SNORA25.14-201ENST00000516481 132 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
CDK3Q00526 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.01□□□□□ -2.09
CDK3Q00526 AC112487.2-201ENST00000637950 304 ntBASIC2.01□□□□□ -2.09
CDK3Q00526 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CDK3Q00526 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDK3Q00526 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDK3Q00526 LINC02555-201ENST00000563933 1951 ntBASIC2□□□□□ -2.09
CDK3Q00526 Y_RNA.106-201ENST00000363189 100 ntBASIC2□□□□□ -2.09
CDK3Q00526 RNU6-245P-201ENST00000384020 107 ntBASIC2□□□□□ -2.09
CDK3Q00526 RNU6-159P-201ENST00000391080 106 ntBASIC2□□□□□ -2.09
CDK3Q00526 MIR190B-201ENST00000401119 79 ntBASIC2□□□□□ -2.09
CDK3Q00526 MIR300-201ENST00000401138 83 ntBASIC2□□□□□ -2.09
CDK3Q00526 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
CDK3Q00526 AC139712.2-201ENST00000424302 339 ntBASIC2□□□□□ -2.09
CDK3Q00526 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDK3Q00526 WARS2P1-201ENST00000429678 537 ntBASIC2□□□□□ -2.09
CDK3Q00526 AC092423.1-201ENST00000430165 186 ntBASIC2□□□□□ -2.09
CDK3Q00526 HMGN2P3-201ENST00000433603 273 ntBASIC2□□□□□ -2.09
CDK3Q00526 HMGN2P5-201ENST00000436882 273 ntBASIC2□□□□□ -2.09
CDK3Q00526 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2□□□□□ -2.09
CDK3Q00526 MTCO3P10-201ENST00000455912 772 ntBASIC2□□□□□ -2.09
CDK3Q00526 RPL17P19-201ENST00000489069 552 ntBASIC2□□□□□ -2.09
CDK3Q00526 AC093303.1-201ENST00000514549 295 ntBASIC2□□□□□ -2.09
CDK3Q00526 RNU6-120P-201ENST00000516077 103 ntBASIC2□□□□□ -2.09
CDK3Q00526 AP005660.1-201ENST00000522972 293 ntBASIC2□□□□□ -2.09
CDK3Q00526 RRN3P3-201ENST00000549207 578 ntBASIC2□□□□□ -2.09
CDK3Q00526 AC007229.1-201ENST00000590455 412 ntBASIC2□□□□□ -2.09
CDK3Q00526 MIR6715A-201ENST00000615929 79 ntBASIC2□□□□□ -2.09
CDK3Q00526 AL359697.1-201ENST00000624879 587 ntBASIC2□□□□□ -2.09
CDK3Q00526 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CDK3Q00526 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CDK3Q00526 RNU1-58P-201ENST00000362413 163 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 RNU6-222P-201ENST00000362438 107 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 Y_RNA.132-201ENST00000363421 102 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 SNORD114-6-201ENST00000364393 72 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 RNU6-890P-201ENST00000384121 107 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 RNU11-3P-201ENST00000391111 133 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 SNORA75.6-201ENST00000391318 127 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CDK3Q00526 MTCYBP4-201ENST00000401524 249 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 MIR1283-1-201ENST00000408494 87 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 USP9YP16-201ENST00000430287 407 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 USP9YP23-201ENST00000455085 407 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 Y_RNA.632-201ENST00000459189 102 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 RNU7-87P-201ENST00000459343 62 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 AC004584.2-201ENST00000570407 410 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 MIR5695-201ENST00000579717 85 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 MIR5694-201ENST00000581190 76 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms