Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC022217.4-201ENST00000604389 163 ntBASIC0.54□□□□□ -2.32
HOXC5Q00444 Z84480.1-201ENST00000605131 311 ntBASIC0.54□□□□□ -2.32
HOXC5Q00444 MIR98-201ENST00000606724 119 ntBASIC0.54□□□□□ -2.32
HOXC5Q00444 AC006566.1-201ENST00000608943 513 ntBASIC0.54□□□□□ -2.32
HOXC5Q00444 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
HOXC5Q00444 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
HOXC5Q00444 RNU6-1305P-201ENST00000364353 104 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 RNU4-48P-201ENST00000365559 182 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 Y_RNA.560-201ENST00000384689 102 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 SNORA40.3-201ENST00000390964 122 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 RNU6-248P-201ENST00000410720 107 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AC004866.1-201ENST00000411748 78 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXC5Q00444 CYCSP46-201ENST00000423569 204 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.53□□□□□ -2.32
HOXC5Q00444 AC245047.7-201ENST00000440265 293 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXC5Q00444 NFU1P2-201ENST00000448700 469 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HOXC5Q00444 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXC5Q00444 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXC5Q00444 RNU6-759P-201ENST00000516740 103 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 RNU6-323P-201ENST00000521915 107 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXC5Q00444 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXC5Q00444 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXC5Q00444 MIR4778-201ENST00000577635 80 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AC022432.1-201ENST00000595739 310 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXC5Q00444 AC146944.4-201ENST00000602697 718 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AL390123.1-201ENST00000603216 237 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AC011458.1-201ENST00000604034 617 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 RNU6-85P-201ENST00000605989 107 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AP001506.1-201ENST00000615444 211 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 AC079248.2-201ENST00000623779 326 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXC5Q00444 SNORD3E-202ENST00000627253 216 ntBASIC0.53□□□□□ -2.32
HOXC5Q00444 RNA5SP361-201ENST00000362686 118 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 RNU4-21P-201ENST00000362802 126 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 Y_RNA.164-201ENST00000363709 102 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 RNU6-553P-201ENST00000364047 96 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 RNU6-969P-201ENST00000383900 105 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 Y_RNA.399-201ENST00000383955 105 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 SNORA12.1-201ENST00000390873 148 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AF228730.1-201ENST00000397972 663 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AL031577.2-201ENST00000404133 280 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
HOXC5Q00444 AC016909.1-201ENST00000415916 166 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.52□□□□□ -2.33
HOXC5Q00444 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.52□□□□□ -2.33
HOXC5Q00444 CETN4P-201ENST00000432407 469 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.52□□□□□ -2.33
HOXC5Q00444 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.52□□□□□ -2.33
HOXC5Q00444 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.52□□□□□ -2.33
HOXC5Q00444 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.52□□□□□ -2.33
HOXC5Q00444 MTCO3P8-201ENST00000453691 755 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 RNU7-125P-201ENST00000458760 62 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 RPS29P27-201ENST00000463711 170 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.52□□□□□ -2.33
HOXC5Q00444 HMGB1P29-201ENST00000505659 499 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.52□□□□□ -2.33
HOXC5Q00444 AC025465.4-201ENST00000513422 638 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AC060788.1-201ENST00000521318 469 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AC024995.1-201ENST00000523014 93 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 MIR4714-201ENST00000580728 77 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 MIR3682-201ENST00000581338 84 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 AC027449.1-201ENST00000608890 407 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 TCL6_2.1-201ENST00000615162 119 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 MIR8070-201ENST00000616510 88 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 MIR8054-201ENST00000620877 86 ntBASIC0.52□□□□□ -2.33
HOXC5Q00444 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
HOXC5Q00444 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
HOXC5Q00444 RNU4-12P-201ENST00000365233 139 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 SNORD73A-201ENST00000386062 65 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
HOXC5Q00444 SNORD12-201ENST00000391002 90 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 AL355796.1-201ENST00000406706 323 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 RN7SKP200-201ENST00000410564 320 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.51□□□□□ -2.33
HOXC5Q00444 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.51□□□□□ -2.33
HOXC5Q00444 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.51□□□□□ -2.33
HOXC5Q00444 AL031667.1-201ENST00000440222 725 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.51□□□□□ -2.33
HOXC5Q00444 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.51□□□□□ -2.33
HOXC5Q00444 RNU7-167P-201ENST00000459160 62 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 GMFBP1-201ENST00000467831 427 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.51□□□□□ -2.33
HOXC5Q00444 SNORA18.6-201ENST00000516792 115 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.51□□□□□ -2.33
HOXC5Q00444 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.51□□□□□ -2.33
HOXC5Q00444 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.51□□□□□ -2.33
HOXC5Q00444 AC234772.3-201ENST00000602277 528 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 uc_338.11-201ENST00000619132 160 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 U6.108-201ENST00000637764 58 ntBASIC0.51□□□□□ -2.33
HOXC5Q00444 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms