Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MTND4LP32-201ENST00000636111 270 ntBASIC2.02□□□□□ -2.09
IRX4P78413 RNA5SP276-201ENST00000362580 94 ntBASIC2.01□□□□□ -2.09
IRX4P78413 Y_RNA.67-201ENST00000362870 100 ntBASIC2.01□□□□□ -2.09
IRX4P78413 RNU5B-2P-201ENST00000363036 113 ntBASIC2.01□□□□□ -2.09
IRX4P78413 RNU6-1188P-201ENST00000363795 107 ntBASIC2.01□□□□□ -2.09
IRX4P78413 Y_RNA.259-201ENST00000364619 101 ntBASIC2.01□□□□□ -2.09
IRX4P78413 SNORA12-201ENST00000391162 147 ntBASIC2.01□□□□□ -2.09
IRX4P78413 MIR208B-201ENST00000401172 77 ntBASIC2.01□□□□□ -2.09
IRX4P78413 AL139156.1-201ENST00000412785 841 ntBASIC2.01□□□□□ -2.09
IRX4P78413 AC012306.1-201ENST00000423267 114 ntBASIC2.01□□□□□ -2.09
IRX4P78413 AC096920.1-201ENST00000423991 241 ntBASIC2.01□□□□□ -2.09
IRX4P78413 USMG5P1-201ENST00000425964 177 ntBASIC2.01□□□□□ -2.09
IRX4P78413 AC087477.1-201ENST00000465747 340 ntBASIC2.01□□□□□ -2.09
IRX4P78413 RPL23AP63-201ENST00000498752 471 ntBASIC2.01□□□□□ -2.09
IRX4P78413 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.01□□□□□ -2.09
IRX4P78413 Y_RNA.675-201ENST00000516389 149 ntBASIC2.01□□□□□ -2.09
IRX4P78413 SCARNA16.2-201ENST00000516520 172 ntBASIC2.01□□□□□ -2.09
IRX4P78413 RNA5SP384-201ENST00000516615 116 ntBASIC2.01□□□□□ -2.09
IRX4P78413 RNU6-567P-201ENST00000516746 107 ntBASIC2.01□□□□□ -2.09
IRX4P78413 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.01□□□□□ -2.09
IRX4P78413 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.01□□□□□ -2.09
IRX4P78413 CYP4A27P-201ENST00000567218 190 ntBASIC2.01□□□□□ -2.09
IRX4P78413 AC026271.5-201ENST00000577873 130 ntBASIC2.01□□□□□ -2.09
IRX4P78413 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
IRX4P78413 MIR4795-201ENST00000584182 89 ntBASIC2.01□□□□□ -2.09
IRX4P78413 AL117336.2-201ENST00000602435 335 ntBASIC2.01□□□□□ -2.09
IRX4P78413 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.01□□□□□ -2.09
IRX4P78413 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
IRX4P78413 CENPCP1-201ENST00000533085 2578 ntBASIC2□□□□□ -2.09
IRX4P78413 Y_RNA.58-201ENST00000362807 102 ntBASIC2□□□□□ -2.09
IRX4P78413 Y_RNA.154-201ENST00000363624 102 ntBASIC2□□□□□ -2.09
IRX4P78413 RNY3P1-201ENST00000365085 102 ntBASIC2□□□□□ -2.09
IRX4P78413 RNY3-201ENST00000365484 102 ntBASIC2□□□□□ -2.09
IRX4P78413 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
IRX4P78413 RNU6-611P-201ENST00000384276 104 ntBASIC2□□□□□ -2.09
IRX4P78413 Y_RNA.490-201ENST00000384413 102 ntBASIC2□□□□□ -2.09
IRX4P78413 RNU6-331P-201ENST00000384724 107 ntBASIC2□□□□□ -2.09
IRX4P78413 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
IRX4P78413 MIR1262-201ENST00000408276 93 ntBASIC2□□□□□ -2.09
IRX4P78413 AC243428.1-201ENST00000421099 264 ntBASIC2□□□□□ -2.09
IRX4P78413 AL353997.1-201ENST00000432936 108 ntBASIC2□□□□□ -2.09
IRX4P78413 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2□□□□□ -2.09
IRX4P78413 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2□□□□□ -2.09
IRX4P78413 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2□□□□□ -2.09
IRX4P78413 Y_RNA.632-201ENST00000459189 102 ntBASIC2□□□□□ -2.09
IRX4P78413 AC022616.8-201ENST00000533569 253 ntBASIC2□□□□□ -2.09
IRX4P78413 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2□□□□□ -2.09
IRX4P78413 MIR3923-201ENST00000579521 83 ntBASIC2□□□□□ -2.09
IRX4P78413 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2□□□□□ -2.09
IRX4P78413 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2□□□□□ -2.09
IRX4P78413 AL359697.1-201ENST00000624879 587 ntBASIC2□□□□□ -2.09
IRX4P78413 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
IRX4P78413 ZNF299P-201ENST00000406845 1804 ntBASIC2□□□□□ -2.09
IRX4P78413 ZNF355P-201ENST00000427301 3216 ntBASIC2□□□□□ -2.09
IRX4P78413 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
IRX4P78413 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.99□□□□□ -2.09
IRX4P78413 MIR378A-201ENST00000362177 66 ntBASIC1.99□□□□□ -2.09
IRX4P78413 SNORD116-29-201ENST00000384516 83 ntBASIC1.99□□□□□ -2.09
IRX4P78413 RNU6-310P-201ENST00000384655 107 ntBASIC1.99□□□□□ -2.09
IRX4P78413 RNY4P36-201ENST00000391116 96 ntBASIC1.99□□□□□ -2.09
IRX4P78413 MTCYBP2-201ENST00000407745 171 ntBASIC1.99□□□□□ -2.09
IRX4P78413 RNA5SP201-201ENST00000410316 124 ntBASIC1.99□□□□□ -2.09
IRX4P78413 Y_RNA.646-201ENST00000410980 101 ntBASIC1.99□□□□□ -2.09
IRX4P78413 AL445685.2-201ENST00000422551 342 ntBASIC1.99□□□□□ -2.09
IRX4P78413 Z82188.1-201ENST00000436709 154 ntBASIC1.99□□□□□ -2.09
IRX4P78413 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.99□□□□□ -2.09
IRX4P78413 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.99□□□□□ -2.09
IRX4P78413 RPL30P15-201ENST00000457129 321 ntBASIC1.99□□□□□ -2.09
IRX4P78413 PRELID3BP1-201ENST00000457142 540 ntBASIC1.99□□□□□ -2.09
IRX4P78413 RPL23AP75-201ENST00000491601 451 ntBASIC1.99□□□□□ -2.09
IRX4P78413 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.99□□□□□ -2.09
IRX4P78413 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.99□□□□□ -2.09
IRX4P78413 MIR5696-201ENST00000578474 85 ntBASIC1.99□□□□□ -2.09
IRX4P78413 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.99□□□□□ -2.09
IRX4P78413 snoU13.31-201ENST00000607291 104 ntBASIC1.99□□□□□ -2.09
IRX4P78413 AL359314.1-201ENST00000616913 261 ntBASIC1.99□□□□□ -2.09
IRX4P78413 AL162373.1-201ENST00000620433 407 ntBASIC1.99□□□□□ -2.09
IRX4P78413 AC104985.2-201ENST00000620598 500 ntBASIC1.99□□□□□ -2.09
IRX4P78413 SCARNA4-201ENST00000629045 128 ntBASIC1.99□□□□□ -2.09
IRX4P78413 MIR1248-201ENST00000629190 106 ntBASIC1.99□□□□□ -2.09
IRX4P78413 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
IRX4P78413 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
IRX4P78413 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
IRX4P78413 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
IRX4P78413 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
IRX4P78413 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
IRX4P78413 RNU6-378P-201ENST00000384324 107 ntBASIC1.98□□□□□ -2.09
IRX4P78413 MTCO3P29-201ENST00000432119 779 ntBASIC1.98□□□□□ -2.09
IRX4P78413 RPL23AP50-201ENST00000434149 455 ntBASIC1.98□□□□□ -2.09
IRX4P78413 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.98□□□□□ -2.09
IRX4P78413 MTCO3P10-201ENST00000455912 772 ntBASIC1.98□□□□□ -2.09
IRX4P78413 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.98□□□□□ -2.09
IRX4P78413 Y_RNA.653-201ENST00000459091 95 ntBASIC1.98□□□□□ -2.09
IRX4P78413 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
IRX4P78413 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.98□□□□□ -2.09
IRX4P78413 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
IRX4P78413 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.98□□□□□ -2.09
IRX4P78413 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.98□□□□□ -2.09
IRX4P78413 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
IRX4P78413 MIR5690-201ENST00000583739 73 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms