Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.46□□□□□ -2.48
UBA52P62987 MIR4789-201ENST00000577469 82 ntBASIC-0.46□□□□□ -2.48
UBA52P62987 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.46□□□□□ -2.48
UBA52P62987 AP000568.1-201ENST00000282964 442 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 RNU6-545P-201ENST00000362681 104 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 SNORA25.3-201ENST00000363205 127 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 RNU6-674P-201ENST00000363831 107 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 MIR610-201ENST00000385139 96 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 SNORA75.6-201ENST00000391318 127 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 RNU2-42P-201ENST00000410697 113 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 RPS26P42-201ENST00000413485 326 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 AC245047.3-201ENST00000429428 127 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 MTND4P15-201ENST00000437913 1033 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 RNA5SP94-201ENST00000516917 108 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 MIR8076-201ENST00000611401 83 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 AC024940.5-201ENST00000622889 474 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 AP000943.4-201ENST00000622912 357 ntBASIC-0.47□□□□□ -2.48
UBA52P62987 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.48□□□□□ -2.49
UBA52P62987 RNU6-48P-201ENST00000384161 107 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 MIR938-201ENST00000401216 83 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 MRPL42P3-201ENST00000401492 326 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.48□□□□□ -2.49
UBA52P62987 MRPS10P2-201ENST00000431226 381 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.48□□□□□ -2.49
UBA52P62987 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 RN7SKP164-201ENST00000516138 266 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 RNU6-677P-201ENST00000516914 101 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 MIR4300-201ENST00000581016 96 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 RBM11P1-201ENST00000604951 799 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.48□□□□□ -2.49
UBA52P62987 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.48□□□□□ -2.49
UBA52P62987 RNU6-853P-201ENST00000364306 107 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 SNORA8.2-201ENST00000384372 139 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 RNU6-747P-201ENST00000390928 104 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 RNU6-241P-201ENST00000391148 104 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 PCNPP3-201ENST00000393579 471 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AL663109.1-201ENST00000411498 844 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AL590632.1-201ENST00000424289 371 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AL356583.2-201ENST00000426536 280 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AL590623.1-201ENST00000427864 105 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.49□□□□□ -2.49
UBA52P62987 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.49□□□□□ -2.49
UBA52P62987 USP9YP28-201ENST00000435142 589 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AC005002.2-201ENST00000438228 269 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.49□□□□□ -2.49
UBA52P62987 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.49□□□□□ -2.49
UBA52P62987 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.49□□□□□ -2.49
UBA52P62987 DEFB108A-201ENST00000530110 222 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 RPL17P51-201ENST00000605218 238 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 AC007684.1-201ENST00000609671 477 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
UBA52P62987 AC103706.2-201ENST00000638080 240 ntBASIC-0.49□□□□□ -2.49
UBA52P62987 SNORA9.1-201ENST00000362412 131 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 RNU4-9P-201ENST00000364951 139 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 RNU6-424P-201ENST00000384367 105 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 SNORA32.3-201ENST00000384772 121 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 MIR593-201ENST00000384856 100 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 RNU6-127P-201ENST00000390897 107 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 RNU6-679P-201ENST00000391003 106 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.5□□□□□ -2.49
UBA52P62987 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.5□□□□□ -2.49
UBA52P62987 AL590135.1-201ENST00000422215 156 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC019205.3-201ENST00000424573 156 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC016700.2-201ENST00000446011 156 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.5□□□□□ -2.49
UBA52P62987 AC015911.1-201ENST00000495111 156 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 RNA5SP67-201ENST00000516422 131 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 RNU7-128P-201ENST00000517247 62 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
UBA52P62987 AC007751.1-201ENST00000529260 376 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.5□□□□□ -2.49
UBA52P62987 MIR4743-201ENST00000584576 69 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC104695.3-201ENST00000604052 296 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC090186.1-201ENST00000605991 572 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC104458.1-201ENST00000608243 463 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 AC138749.5-201ENST00000611461 208 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.5□□□□□ -2.49
UBA52P62987 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
UBA52P62987 MIR1-1-201ENST00000362147 71 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 MIR409-201ENST00000362237 79 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 RNU6-289P-201ENST00000364093 107 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 AC083799.1-201ENST00000366451 910 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
UBA52P62987 RNU6-378P-201ENST00000384324 107 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.51□□□□□ -2.49
UBA52P62987 CDK8P2-201ENST00000415020 547 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 CALM2P4-201ENST00000430810 426 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 AC093850.1-201ENST00000454121 251 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.51□□□□□ -2.49
UBA52P62987 AC093899.1-201ENST00000457984 376 ntBASIC-0.51□□□□□ -2.49
UBA52P62987 SNORD4A-201ENST00000459174 72 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms