Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC092634.7-201ENST00000621022 103 ntBASIC-0.14□□□□□ -2.43
LSM3P62310 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.15□□□□□ -2.43
LSM3P62310 SNORD116.1-201ENST00000365628 92 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 MIR526A1-201ENST00000384897 85 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 AC007327.1-201ENST00000447461 264 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.15□□□□□ -2.43
LSM3P62310 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 AC004584.2-201ENST00000570407 410 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 EIF1P4-201ENST00000572664 335 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 MIR4300-201ENST00000581016 96 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 AL121895.2-201ENST00000619558 447 ntBASIC-0.15□□□□□ -2.43
LSM3P62310 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.15□□□□□ -2.43
LSM3P62310 MIR18A-201ENST00000362310 71 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 RNU1-133P-201ENST00000364867 167 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 MIR573-201ENST00000384964 99 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
LSM3P62310 MTCYBP36-201ENST00000404146 440 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 MIR1276-201ENST00000408707 83 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 AL117339.3-201ENST00000418733 162 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 AC106883.1-201ENST00000418805 562 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.16□□□□□ -2.44
LSM3P62310 RNU6-863P-201ENST00000515989 104 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 AC069113.3-201ENST00000521019 150 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
LSM3P62310 AC016256.1-201ENST00000547971 354 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 AL078595.3-201ENST00000623815 1166 ntBASIC-0.16□□□□□ -2.44
LSM3P62310 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
LSM3P62310 AL589826.1-201ENST00000340697 249 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 SNORD114-5-201ENST00000362928 70 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 RNA5SP214-201ENST00000363378 118 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 RNU6-641P-201ENST00000384006 107 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 SNORD116-12-201ENST00000384468 92 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 MIR518A1-201ENST00000385068 85 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 ERHP2-201ENST00000402323 299 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 RNU2-8P-201ENST00000410727 190 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 SNORD83.1-201ENST00000411362 77 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 MED13P1-201ENST00000428342 171 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 AL031274.1-201ENST00000450334 232 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 MTCO3P8-201ENST00000453691 755 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.17□□□□□ -2.44
LSM3P62310 AP000870.1-201ENST00000472927 406 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 RNU4-77P-201ENST00000516692 156 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 RNU6-685P-201ENST00000517088 95 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 RPL23AP91-201ENST00000569211 455 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 MIR4768-201ENST00000585270 74 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 AL162424.1-201ENST00000602325 221 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 AC013244.3-201ENST00000605614 388 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 AC078938.1-201ENST00000620993 318 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 MIR6079-201ENST00000635807 62 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 MIR4315-1-201ENST00000636800 73 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 MIR4315-2-201ENST00000640925 73 ntBASIC-0.17□□□□□ -2.44
LSM3P62310 RNA5SP517-201ENST00000364724 117 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 RNU6-116P-201ENST00000384042 109 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 RNU2-39P-201ENST00000410604 198 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.18□□□□□ -2.44
LSM3P62310 RNU7-12P-201ENST00000516030 62 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 SNORA25.12-201ENST00000516202 82 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 MTATP6P15-201ENST00000527233 835 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 AL137100.2-201ENST00000555786 315 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 7SK.7-201ENST00000603504 247 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 AP001836.1-201ENST00000604675 523 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 MIR6718-201ENST00000616153 80 ntBASIC-0.18□□□□□ -2.44
LSM3P62310 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.18□□□□□ -2.44
LSM3P62310 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.18□□□□□ -2.44
LSM3P62310 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 RNU4-1-201ENST00000363925 141 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 RNU6-827P-201ENST00000365553 106 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.19□□□□□ -2.44
LSM3P62310 TAF9P1-201ENST00000445421 515 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.19□□□□□ -2.44
LSM3P62310 TAF9P2-201ENST00000454958 515 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 MTATP6P9-201ENST00000515039 680 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 MIR4514-201ENST00000581410 57 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 SNORA25.18-201ENST00000607153 114 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 AL136221.1-201ENST00000621449 509 ntBASIC-0.19□□□□□ -2.44
LSM3P62310 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.19□□□□□ -2.44
LSM3P62310 AC005592.1-201ENST00000566527 1640 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 SNORA42.1-201ENST00000363515 137 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 RNU6-654P-201ENST00000364373 107 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 RNU6-809P-201ENST00000384461 107 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 RNU6-679P-201ENST00000391003 106 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 AC004854.1-201ENST00000440356 349 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 AC117522.1-201ENST00000509821 380 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 RN7SKP164-201ENST00000516138 266 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.2□□□□□ -2.44
LSM3P62310 AC068790.2-201ENST00000602601 557 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 AC104408.1-201ENST00000605241 170 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC-0.2□□□□□ -2.44
LSM3P62310 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 AC015726.2-201ENST00000620112 122 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 AC126544.2-201ENST00000625174 749 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 snoZ196.1-201ENST00000625269 89 ntBASIC-0.2□□□□□ -2.44
LSM3P62310 RNY4P24-201ENST00000362735 96 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms