| WNT3 | P56703 | SNORD11B-201 | ENST00000607707 | 90 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC010205.1-201 | ENST00000616668 | 449 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| WNT3 | P56703 | MIR6733-201 | ENST00000635723 | 61 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC096644.4-201 | ENST00000563417 | 2912 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC000403.1-201 | ENST00000613696 | 3585 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| WNT3 | P56703 | IKZF2-213 | ENST00000457361 | 9350 nt | TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| WNT3 | P56703 | HIF1A-201 | ENST00000323441 | 3555 nt | TSL 1 (best) BASIC | 2.69 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC009487.2-201 | ENST00000420969 | 6821 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC108206.1-201 | ENST00000570186 | 4159 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | GABRG2-221 | ENST00000639683 | 3600 nt | TSL 5 BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | Y_RNA.105-201 | ENST00000363182 | 111 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-961P-201 | ENST00000363893 | 105 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SNORD87-201 | ENST00000364849 | 89 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNA5SP240-201 | ENST00000365355 | 128 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | U8.9-201 | ENST00000365667 | 134 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | Y_RNA.498-201 | ENST00000384460 | 102 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-1026P-201 | ENST00000384465 | 108 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU2-32P-201 | ENST00000411193 | 191 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | CBX3P6-201 | ENST00000430257 | 527 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC107083.1-201 | ENST00000439643 | 279 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC007395.1-201 | ENST00000451333 | 677 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | LINC01399-202 | ENST00000458450 | 244 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU7-14P-201 | ENST00000459331 | 62 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-1143P-201 | ENST00000516125 | 104 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | LINC02386-203 | ENST00000552182 | 501 nt | TSL 3 BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AL449363.1-201 | ENST00000617815 | 186 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | NAA50-211 | ENST00000630058 | 177 nt | TSL 5 BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | PIK3C2G-206 | ENST00000538779 | 4963 nt | TSL 5 BASIC | 2.68 | □□□□□ -1.98 | | |
| WNT3 | P56703 | MRPL42-202 | ENST00000393128 | 1983 nt | APPRIS ALT1 TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | ZMYM1-210 | ENST00000611874 | 4466 nt | APPRIS P1 TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SLC6A15-202 | ENST00000309283 | 3108 nt | TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SEL1L2-201 | ENST00000284951 | 2224 nt | APPRIS P1 TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNA5SP125-201 | ENST00000364843 | 120 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-546P-201 | ENST00000383991 | 107 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | Y_RNA.510-201 | ENST00000384511 | 114 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SNORA26.7-201 | ENST00000391288 | 122 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | LINC00428-201 | ENST00000415620 | 227 nt | TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | EEF1B2P7-201 | ENST00000451177 | 676 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AL590422.1-201 | ENST00000451829 | 364 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AL583859.1-201 | ENST00000455871 | 335 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RN7SL297P-201 | ENST00000483161 | 293 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC116563.1-201 | ENST00000505454 | 396 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RPL23AP94-201 | ENST00000512518 | 302 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SCGB1D5P-201 | ENST00000515134 | 247 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-570P-201 | ENST00000517051 | 105 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC012413.1-201 | ENST00000521294 | 519 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AP003733.2-201 | ENST00000529409 | 171 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC018448.1-201 | ENST00000552843 | 316 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC136932.1-201 | ENST00000574771 | 208 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | MIR3149-201 | ENST00000584629 | 83 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | DLX6-AS1_2.1-201 | ENST00000613701 | 207 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | QSER1-204 | ENST00000527788 | 5052 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| WNT3 | P56703 | PLOD2-204 | ENST00000461497 | 3043 nt | TSL 2 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-626P-201 | ENST00000363354 | 107 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SNORA72.2-201 | ENST00000365028 | 127 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-234P-201 | ENST00000365229 | 104 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-20P-201 | ENST00000384106 | 107 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | Y_RNA.461-201 | ENST00000384263 | 103 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-121P-201 | ENST00000410525 | 99 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | Y_RNA.602-201 | ENST00000410535 | 92 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | NCKAP5-IT1-201 | ENST00000416437 | 554 nt | TSL 4 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RPL21P38-201 | ENST00000418090 | 167 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC005002.2-201 | ENST00000438228 | 269 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AL353743.2-202 | ENST00000439544 | 473 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | TRAPPC2P8-201 | ENST00000440676 | 396 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AL135938.1-201 | ENST00000443141 | 297 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC234781.5-202 | ENST00000453508 | 426 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RPL26P26-201 | ENST00000480251 | 434 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC098869.1-201 | ENST00000481627 | 292 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | LINC02064-201 | ENST00000506492 | 470 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | VTRNA2-2P-201 | ENST00000516091 | 103 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RNU6-344P-201 | ENST00000516635 | 111 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | CYCSP23-201 | ENST00000519781 | 313 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC090124.1-201 | ENST00000525097 | 448 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | NKAIN2-205 | ENST00000546092 | 148 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | AC107016.2-201 | ENST00000547968 | 190 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | MYL12BP1-201 | ENST00000569826 | 507 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | MIR4300-201 | ENST00000581016 | 96 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | RPL17P51-201 | ENST00000605218 | 238 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | U4.1-201 | ENST00000620349 | 87 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | MIR8062-201 | ENST00000621515 | 85 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SCOC-201 | ENST00000338517 | 1864 nt | TSL 4 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | PRKACB-218 | ENST00000610703 | 4240 nt | TSL 2 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | ZNF334-205 | ENST00000615481 | 3706 nt | APPRIS ALT2 TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | CFH-202 | ENST00000367429 | 4127 nt | APPRIS P1 TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| WNT3 | P56703 | LINC02555-201 | ENST00000563933 | 1951 nt | BASIC | 2.65 | □□□□□ -1.98 | | |
| WNT3 | P56703 | SAMD9-201 | ENST00000379958 | 6852 nt | APPRIS P1 TSL 1 (best) BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | RNU6-1305P-201 | ENST00000364353 | 104 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | RNU6-851P-201 | ENST00000384565 | 107 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | LINC00407-201 | ENST00000426509 | 295 nt | TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | TRBV25OR9-2-201 | ENST00000438417 | 374 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | AC104389.3-201 | ENST00000445629 | 235 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | AL365295.1-201 | ENST00000454942 | 514 nt | TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | RN7SKP132-201 | ENST00000516001 | 208 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | SNORA9.3-201 | ENST00000516383 | 129 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | AC124657.1-201 | ENST00000527819 | 429 nt | TSL 3 BASIC | 2.65 | □□□□□ -1.99 | | |
| WNT3 | P56703 | MIR3605-201 | ENST00000583214 | 100 nt | BASIC | 2.65 | □□□□□ -1.99 | | |