Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.5□□□□□ -2.17
LIM2P55344 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LIM2P55344 RNU6-831P-201ENST00000384548 107 ntBASIC1.49□□□□□ -2.17
LIM2P55344 MIR586-201ENST00000385035 97 ntBASIC1.49□□□□□ -2.17
LIM2P55344 SNORA12.2-201ENST00000391040 156 ntBASIC1.49□□□□□ -2.17
LIM2P55344 RNU6-192P-201ENST00000391253 100 ntBASIC1.49□□□□□ -2.17
LIM2P55344 AL139396.1-201ENST00000421137 167 ntBASIC1.49□□□□□ -2.17
LIM2P55344 AL590632.1-201ENST00000424289 371 ntBASIC1.49□□□□□ -2.17
LIM2P55344 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.49□□□□□ -2.17
LIM2P55344 AC004386.2-201ENST00000441858 148 ntBASIC1.49□□□□□ -2.17
LIM2P55344 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.49□□□□□ -2.17
LIM2P55344 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.49□□□□□ -2.17
LIM2P55344 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
LIM2P55344 AC015712.3-201ENST00000559380 164 ntBASIC1.49□□□□□ -2.17
LIM2P55344 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.49□□□□□ -2.17
LIM2P55344 SNORA59B-202ENST00000578183 701 ntBASIC1.49□□□□□ -2.17
LIM2P55344 MIR5696-201ENST00000578474 85 ntBASIC1.49□□□□□ -2.17
LIM2P55344 MIR3942-201ENST00000585264 109 ntBASIC1.49□□□□□ -2.17
LIM2P55344 AC080078.2-201ENST00000603766 501 ntBASIC1.49□□□□□ -2.17
LIM2P55344 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.49□□□□□ -2.17
LIM2P55344 AC008873.1-201ENST00000625051 138 ntBASIC1.49□□□□□ -2.17
LIM2P55344 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LIM2P55344 RNU1-17P-201ENST00000363022 152 ntBASIC1.48□□□□□ -2.17
LIM2P55344 RNU6-1235P-201ENST00000384559 107 ntBASIC1.48□□□□□ -2.17
LIM2P55344 MIR153-2-201ENST00000385225 87 ntBASIC1.48□□□□□ -2.17
LIM2P55344 RNU6-510P-201ENST00000391239 108 ntBASIC1.48□□□□□ -2.17
LIM2P55344 RNA5SP100-201ENST00000410903 110 ntBASIC1.48□□□□□ -2.17
LIM2P55344 RNA5SP59-201ENST00000410922 110 ntBASIC1.48□□□□□ -2.17
LIM2P55344 NCOR1P3-201ENST00000420479 303 ntBASIC1.48□□□□□ -2.17
LIM2P55344 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.48□□□□□ -2.17
LIM2P55344 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.48□□□□□ -2.17
LIM2P55344 NFU1P2-201ENST00000448700 469 ntBASIC1.48□□□□□ -2.17
LIM2P55344 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.48□□□□□ -2.17
LIM2P55344 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.48□□□□□ -2.17
LIM2P55344 RNU6-498P-201ENST00000459468 107 ntBASIC1.48□□□□□ -2.17
LIM2P55344 AC108210.2-201ENST00000503681 201 ntBASIC1.48□□□□□ -2.17
LIM2P55344 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.48□□□□□ -2.17
LIM2P55344 RNU6-948P-201ENST00000516374 107 ntBASIC1.48□□□□□ -2.17
LIM2P55344 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.48□□□□□ -2.17
LIM2P55344 RNA5SP454-201ENST00000517231 127 ntBASIC1.48□□□□□ -2.17
LIM2P55344 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.48□□□□□ -2.17
LIM2P55344 MIR3198-2-201ENST00000577868 80 ntBASIC1.48□□□□□ -2.17
LIM2P55344 MIR5006-201ENST00000583027 110 ntBASIC1.48□□□□□ -2.17
LIM2P55344 AC018638.8-201ENST00000588755 281 ntBASIC1.48□□□□□ -2.17
LIM2P55344 AC068790.6-201ENST00000602558 258 ntBASIC1.48□□□□□ -2.17
LIM2P55344 7SK.7-201ENST00000603504 247 ntBASIC1.48□□□□□ -2.17
LIM2P55344 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
LIM2P55344 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.48□□□□□ -2.17
LIM2P55344 AC093913.1-201ENST00000614178 329 ntBASIC1.48□□□□□ -2.17
LIM2P55344 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.48□□□□□ -2.17
LIM2P55344 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.48□□□□□ -2.17
LIM2P55344 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.48□□□□□ -2.17
LIM2P55344 AL359757.2-201ENST00000624309 274 ntBASIC1.48□□□□□ -2.17
LIM2P55344 AC022513.1-201ENST00000624512 117 ntBASIC1.48□□□□□ -2.17
LIM2P55344 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.48□□□□□ -2.17
LIM2P55344 AC100810.6-201ENST00000638068 285 ntBASIC1.48□□□□□ -2.17
LIM2P55344 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
LIM2P55344 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.48□□□□□ -2.17
LIM2P55344 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
LIM2P55344 RNU6-661P-201ENST00000362409 107 ntBASIC1.47□□□□□ -2.17
LIM2P55344 MIR548F1-201ENST00000408667 84 ntBASIC1.47□□□□□ -2.17
LIM2P55344 C8orf59P1-201ENST00000429930 303 ntBASIC1.47□□□□□ -2.17
LIM2P55344 ATP5J2P3-201ENST00000451550 258 ntBASIC1.47□□□□□ -2.17
LIM2P55344 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.47□□□□□ -2.17
LIM2P55344 RNVU1-2-201ENST00000516326 135 ntBASIC1.47□□□□□ -2.17
LIM2P55344 RNU6-566P-201ENST00000516790 107 ntBASIC1.47□□□□□ -2.17
LIM2P55344 AF235103.2-201ENST00000525753 346 ntBASIC1.47□□□□□ -2.17
LIM2P55344 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.47□□□□□ -2.17
LIM2P55344 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
LIM2P55344 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.47□□□□□ -2.17
LIM2P55344 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.47□□□□□ -2.17
LIM2P55344 AL159152.1-201ENST00000635019 2587 ntBASIC1.47□□□□□ -2.17
LIM2P55344 Y_RNA.72-201ENST00000362894 103 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RNU6-593P-201ENST00000364716 112 ntBASIC1.46□□□□□ -2.18
LIM2P55344 Y_RNA.301-201ENST00000364990 103 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RNU6-975P-201ENST00000384296 105 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RNA5SP213-201ENST00000391031 106 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RNU6-174P-201ENST00000410406 106 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RNU6-1148P-201ENST00000410992 104 ntBASIC1.46□□□□□ -2.18
LIM2P55344 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.46□□□□□ -2.18
LIM2P55344 MTND1P4-201ENST00000435196 415 ntBASIC1.46□□□□□ -2.18
LIM2P55344 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.46□□□□□ -2.18
LIM2P55344 NDUFB4P10-201ENST00000452541 359 ntBASIC1.46□□□□□ -2.18
LIM2P55344 snoU13.30-201ENST00000458951 104 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RN7SKP210-201ENST00000459176 261 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RNA5SP57-201ENST00000459463 123 ntBASIC1.46□□□□□ -2.18
LIM2P55344 AC097473.1-201ENST00000508142 408 ntBASIC1.46□□□□□ -2.18
LIM2P55344 RNU1-54P-201ENST00000517181 120 ntBASIC1.46□□□□□ -2.18
LIM2P55344 GNAI2P1-201ENST00000541815 315 ntBASIC1.46□□□□□ -2.18
LIM2P55344 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.46□□□□□ -2.18
LIM2P55344 AC069114.2-201ENST00000604699 304 ntBASIC1.46□□□□□ -2.18
LIM2P55344 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LIM2P55344 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
LIM2P55344 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LIM2P55344 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LIM2P55344 RNU1-62P-201ENST00000362599 164 ntBASIC1.45□□□□□ -2.18
LIM2P55344 MIR515-2-201ENST00000384883 83 ntBASIC1.45□□□□□ -2.18
LIM2P55344 MIR515-1-201ENST00000384884 83 ntBASIC1.45□□□□□ -2.18
LIM2P55344 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.45□□□□□ -2.18
LIM2P55344 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms