Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-378P-201ENST00000384324 107 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 HMGN2P39-201ENST00000398005 273 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 AC012306.1-201ENST00000423267 114 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGCS2P54868 snoU13.6-201ENST00000458785 104 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 FO393415.2-201ENST00000480085 343 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 RNU6-875P-201ENST00000516488 106 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGCS2P54868 CYP4A27P-201ENST00000567218 190 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 MIR5696-201ENST00000578474 85 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 MIR3923-201ENST00000579521 83 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 AC005034.5-201ENST00000604219 466 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 AC018462.2-201ENST00000605375 395 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 AL132822.1-201ENST00000617063 513 ntBASIC1.81□□□□□ -2.12
HMGCS2P54868 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
HMGCS2P54868 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGCS2P54868 Y_RNA.142-201ENST00000363491 102 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 RNU4-13P-201ENST00000364019 141 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 SNORA25B-201ENST00000365507 128 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS2P54868 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HMGCS2P54868 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS2P54868 EIF4EP2-201ENST00000422816 654 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 MTND4P18-201ENST00000447010 465 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGCS2P54868 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMGCS2P54868 AC107399.1-201ENST00000451226 265 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS2P54868 RPL23AP75-201ENST00000491601 451 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGCS2P54868 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS2P54868 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGCS2P54868 Y_RNA.670-201ENST00000516255 105 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 RNU6-277P-201ENST00000516272 106 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 RNU1-54P-201ENST00000517181 120 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AC105029.1-201ENST00000520250 669 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS2P54868 AC233702.2-202ENST00000562547 291 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AC005668.1-201ENST00000571142 476 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AC010928.2-201ENST00000588017 287 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AC009994.1-201ENST00000606889 253 ntBASIC1.8□□□□□ -2.12
HMGCS2P54868 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS2P54868 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.79□□□□□ -2.12
HMGCS2P54868 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGCS2P54868 SNORA7.1-201ENST00000363750 139 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMGCS2P54868 Y_RNA.404-201ENST00000383978 102 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 RNU6-968P-201ENST00000384076 107 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 Y_RNA.482-201ENST00000384377 111 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 MIR517C-201ENST00000385103 95 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCS2P54868 Y_RNA.594-201ENST00000410373 140 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 RPL37P10-201ENST00000412884 288 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 Z82188.1-201ENST00000436709 154 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 MTND5P20-201ENST00000448677 143 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS2P54868 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCS2P54868 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCS2P54868 ACA59.1-201ENST00000515966 143 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 RNU6-1016P-201ENST00000516689 94 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 RNU1-92P-201ENST00000517017 135 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 AC034114.1-201ENST00000520293 285 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 AC134698.4-201ENST00000523451 826 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCS2P54868 AL161670.1-201ENST00000554348 137 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 MIR4448-201ENST00000584360 86 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 AL109918.3-201ENST00000603072 338 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 AC022202.1-201ENST00000613515 211 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 AC104260.1-201ENST00000616660 539 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCS2P54868 MIR1248-201ENST00000629190 106 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HMGCS2P54868 MTND4P12-201ENST00000498999 1377 ntBASIC1.79□□□□□ -2.12
HMGCS2P54868 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.78□□□□□ -2.12
HMGCS2P54868 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
HMGCS2P54868 ZNF702P-202ENST00000434269 1966 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 MTND5P9-201ENST00000503854 1755 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 AC233981.2-201ENST00000611524 1614 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 RNU6-593P-201ENST00000364716 112 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 RNU6-392P-201ENST00000364926 101 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 Y_RNA.533-201ENST00000384596 114 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 MIR487A-201ENST00000385009 80 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 RNU6-1050P-201ENST00000410388 107 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 RNU2-32P-201ENST00000411193 191 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 AC243428.1-201ENST00000421099 264 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 AL353689.1-201ENST00000438895 199 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGCS2P54868 MRPS17P9-201ENST00000511924 393 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 RNU6-965P-201ENST00000516721 96 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 AC022616.8-201ENST00000533569 253 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGCS2P54868 AC109446.1-201ENST00000566172 220 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 MIR4421-201ENST00000578133 69 ntBASIC1.78□□□□□ -2.12
HMGCS2P54868 AP000654.2-201ENST00000605633 586 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms