Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 RNU6-1249P-201ENST00000363237 111 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RNU4-50P-201ENST00000364361 141 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RNU6-1317P-201ENST00000364582 104 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RNU6-200P-201ENST00000364743 107 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 Z98749.2-208ENST00000381646 500 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 Y_RNA.477-201ENST00000384352 108 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RNU6-790P-201ENST00000384479 105 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RNU6-306P-201ENST00000384617 107 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 AL591034.2-201ENST00000402839 359 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RNU6-121P-201ENST00000410525 99 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 BX510359.4-201ENST00000423750 193 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 AC104332.1-201ENST00000440471 797 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 NEFMP1-201ENST00000443423 1006 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RNU6-1037P-201ENST00000459571 107 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RPL9P9-202ENST00000466501 579 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 RPS29P20-201ENST00000489592 171 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A4P53420 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A4P53420 RNU6-798P-201ENST00000516912 103 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 AC012433.1-201ENST00000588916 398 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 AC002044.1-201ENST00000606707 158 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 AC098479.1-201ENST00000609225 154 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 TUG1_2.1-201ENST00000614234 87 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 MIR4272-201ENST00000635924 64 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 AL450472.1-202ENST00000637286 180 ntBASIC1.75□□□□□ -2.13
COL4A4P53420 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
COL4A4P53420 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A4P53420 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
COL4A4P53420 MIR96-201ENST00000362288 78 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 Y_RNA.48-201ENST00000362710 103 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU6-1059P-201ENST00000363752 98 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 Y_RNA.471-201ENST00000384312 102 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 SNORD58.1-201ENST00000391313 66 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU2-33P-201ENST00000410344 192 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU2-14P-201ENST00000411053 191 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 AC007098.1-201ENST00000420122 367 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 EIF4EP2-201ENST00000422816 654 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 PIGPP3-201ENST00000425307 415 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 HMGN2P21-201ENST00000447764 270 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 AC098869.1-201ENST00000481627 292 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 AC018437.1-201ENST00000492214 406 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU6-390P-201ENST00000516259 103 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A4P53420 RNU6-85P-201ENST00000605989 107 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A4P53420 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
COL4A4P53420 Y_RNA.84-201ENST00000363011 104 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 Y_RNA.180-201ENST00000363867 113 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 Y_RNA.276-201ENST00000364732 109 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 SNORA23-201ENST00000365128 182 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU6-45P-201ENST00000384471 107 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 Y_RNA.515-201ENST00000384535 112 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 Y_RNA.533-201ENST00000384596 114 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 MRPL35P1-201ENST00000404272 572 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 AL353621.1-201ENST00000418219 243 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 HMGN2P38-201ENST00000423806 265 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A4P53420 LINC01399-202ENST00000458450 244 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 ACA59.1-201ENST00000515966 143 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU6-1095P-201ENST00000516148 108 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNA5SP476-201ENST00000516613 103 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 RNU6-111P-201ENST00000517179 105 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 MIR4446-201ENST00000578505 67 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 MIR3910-1-201ENST00000580936 111 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 ELOCP5-201ENST00000604924 333 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A4P53420 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.74□□□□□ -2.13
COL4A4P53420 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
COL4A4P53420 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
COL4A4P53420 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
COL4A4P53420 RNU6-1027P-201ENST00000383998 107 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 RNU6-746P-201ENST00000384112 109 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 RNU6-187P-201ENST00000384139 106 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 RNU4-52P-201ENST00000384209 138 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 RNU6-933P-201ENST00000384424 107 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 MIR135A2-201ENST00000384854 100 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL4A4P53420 RNU6-821P-201ENST00000390995 107 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AL033519.2-201ENST00000403958 392 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 HMGN2P19-201ENST00000425149 265 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AL606753.1-201ENST00000427435 87 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AL133396.1-201ENST00000432048 687 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A4P53420 RPL37P6-201ENST00000460682 294 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AC093591.1-201ENST00000491435 481 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AC105758.1-201ENST00000506038 399 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 RNU6-138P-201ENST00000515952 107 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 RNU5B-3P-201ENST00000516601 115 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 SNORA31.22-201ENST00000517204 135 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 CBX3P8-201ENST00000532412 525 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A4P53420 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 OR1M4P-201ENST00000589199 287 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AP001282.2-201ENST00000616149 309 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AL031601.2-202ENST00000622650 282 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 U6.104-201ENST00000637979 90 ntBASIC1.73□□□□□ -2.13
COL4A4P53420 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms