Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
NEK3P51956 AL078596.1-201ENST00000624856 447 ntBASIC2.56□□□□□ -2
NEK3P51956 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.56□□□□□ -2
NEK3P51956 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
NEK3P51956 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NEK3P51956 RNU6-975P-201ENST00000384296 105 ntBASIC2.55□□□□□ -2
NEK3P51956 RNU6-1235P-201ENST00000384559 107 ntBASIC2.55□□□□□ -2
NEK3P51956 MIR549A-201ENST00000385268 96 ntBASIC2.55□□□□□ -2
NEK3P51956 RNU6-1156P-201ENST00000410365 100 ntBASIC2.55□□□□□ -2
NEK3P51956 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.55□□□□□ -2
NEK3P51956 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.55□□□□□ -2
NEK3P51956 MIR2053-201ENST00000459295 91 ntBASIC2.55□□□□□ -2
NEK3P51956 RNU6-498P-201ENST00000459468 107 ntBASIC2.55□□□□□ -2
NEK3P51956 HMGN2P9-201ENST00000476875 229 ntBASIC2.55□□□□□ -2
NEK3P51956 AC107222.1-201ENST00000510899 637 ntBASIC2.55□□□□□ -2
NEK3P51956 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
NEK3P51956 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.55□□□□□ -2
NEK3P51956 UBL5P4-201ENST00000562584 236 ntBASIC2.55□□□□□ -2
NEK3P51956 MIR5695-201ENST00000579717 85 ntBASIC2.55□□□□□ -2
NEK3P51956 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NEK3P51956 AC073544.1-201ENST00000600110 1595 ntBASIC2.54□□□□□ -2
NEK3P51956 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
NEK3P51956 SNORD115-3-201ENST00000363100 82 ntBASIC2.54□□□□□ -2
NEK3P51956 MIR1283-2-201ENST00000408621 87 ntBASIC2.54□□□□□ -2
NEK3P51956 RNU6-1304P-201ENST00000411374 106 ntBASIC2.54□□□□□ -2
NEK3P51956 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.54□□□□□ -2
NEK3P51956 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
NEK3P51956 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
NEK3P51956 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.54□□□□□ -2
NEK3P51956 Y_RNA.683-201ENST00000516508 93 ntBASIC2.54□□□□□ -2
NEK3P51956 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.54□□□□□ -2
NEK3P51956 CTSLP2-204ENST00000629029 392 ntBASIC2.54□□□□□ -2
NEK3P51956 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.54□□□□□ -2
NEK3P51956 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
NEK3P51956 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
NEK3P51956 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.53□□□□□ -2
NEK3P51956 MIR340-201ENST00000362125 95 ntBASIC2.53□□□□□ -2
NEK3P51956 RNU6-23P-201ENST00000363283 107 ntBASIC2.53□□□□□ -2
NEK3P51956 U3.8-201ENST00000363675 217 ntBASIC2.53□□□□□ -2
NEK3P51956 RNA5SP493-201ENST00000364115 91 ntBASIC2.53□□□□□ -2
NEK3P51956 RNU6-1305P-201ENST00000364353 104 ntBASIC2.53□□□□□ -2
NEK3P51956 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
NEK3P51956 MIR559-201ENST00000385188 96 ntBASIC2.53□□□□□ -2
NEK3P51956 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
NEK3P51956 SNORA69.1-201ENST00000390904 137 ntBASIC2.53□□□□□ -2
NEK3P51956 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.53□□□□□ -2
NEK3P51956 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.53□□□□□ -2
NEK3P51956 AF228730.4-201ENST00000421457 183 ntBASIC2.53□□□□□ -2
NEK3P51956 AC139712.2-201ENST00000424302 339 ntBASIC2.53□□□□□ -2
NEK3P51956 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.53□□□□□ -2
NEK3P51956 RNU7-87P-201ENST00000459343 62 ntBASIC2.53□□□□□ -2
NEK3P51956 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
NEK3P51956 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
NEK3P51956 RNU6-856P-201ENST00000516959 98 ntBASIC2.53□□□□□ -2
NEK3P51956 AC093023.1-201ENST00000547375 507 ntBASIC2.53□□□□□ -2
NEK3P51956 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.53□□□□□ -2
NEK3P51956 AC005786.1-201ENST00000588553 154 ntBASIC2.53□□□□□ -2
NEK3P51956 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.53□□□□□ -2
NEK3P51956 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
NEK3P51956 U1.36-201ENST00000620684 176 ntBASIC2.53□□□□□ -2
NEK3P51956 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
NEK3P51956 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NEK3P51956 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
NEK3P51956 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
NEK3P51956 RNU6-874P-201ENST00000362390 105 ntBASIC2.52□□□□□ -2.01
NEK3P51956 RNU6-222P-201ENST00000362438 107 ntBASIC2.52□□□□□ -2.01
NEK3P51956 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
NEK3P51956 Y_RNA.557-201ENST00000384680 107 ntBASIC2.52□□□□□ -2.01
NEK3P51956 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
NEK3P51956 RNU11-3P-201ENST00000391111 133 ntBASIC2.52□□□□□ -2.01
NEK3P51956 AL033519.2-201ENST00000403958 392 ntBASIC2.52□□□□□ -2.01
NEK3P51956 RNA5SP450-201ENST00000411206 102 ntBASIC2.52□□□□□ -2.01
NEK3P51956 AC114482.1-201ENST00000418010 247 ntBASIC2.52□□□□□ -2.01
NEK3P51956 BX510359.4-201ENST00000423750 193 ntBASIC2.52□□□□□ -2.01
NEK3P51956 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.52□□□□□ -2.01
NEK3P51956 AL353689.1-201ENST00000438895 199 ntBASIC2.52□□□□□ -2.01
NEK3P51956 AC091179.3-201ENST00000474761 144 ntBASIC2.52□□□□□ -2.01
NEK3P51956 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.52□□□□□ -2.01
NEK3P51956 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.52□□□□□ -2.01
NEK3P51956 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.52□□□□□ -2.01
NEK3P51956 MIR3169-201ENST00000578032 83 ntBASIC2.52□□□□□ -2.01
NEK3P51956 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.52□□□□□ -2.01
NEK3P51956 C8orf59P2-201ENST00000603441 271 ntBASIC2.52□□□□□ -2.01
NEK3P51956 AC104985.2-201ENST00000620598 500 ntBASIC2.52□□□□□ -2.01
NEK3P51956 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NEK3P51956 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEK3P51956 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEK3P51956 RNA5SP126-201ENST00000365092 109 ntBASIC2.51□□□□□ -2.01
NEK3P51956 RNU6-301P-201ENST00000384277 107 ntBASIC2.51□□□□□ -2.01
NEK3P51956 AL355497.1-201ENST00000406262 551 ntBASIC2.51□□□□□ -2.01
NEK3P51956 Y_RNA.595-201ENST00000410403 105 ntBASIC2.51□□□□□ -2.01
NEK3P51956 RNA5SP508-201ENST00000411327 119 ntBASIC2.51□□□□□ -2.01
NEK3P51956 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.51□□□□□ -2.01
NEK3P51956 RNU6-976P-201ENST00000516086 111 ntBASIC2.51□□□□□ -2.01
NEK3P51956 RNU6-911P-201ENST00000516523 104 ntBASIC2.51□□□□□ -2.01
NEK3P51956 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.51□□□□□ -2.01
NEK3P51956 AL133255.1-201ENST00000606374 441 ntBASIC2.51□□□□□ -2.01
NEK3P51956 MIR1244-1-201ENST00000612829 85 ntBASIC2.51□□□□□ -2.01
NEK3P51956 MIR1244-3-201ENST00000635744 85 ntBASIC2.51□□□□□ -2.01
NEK3P51956 MIR1244-2-201ENST00000636449 85 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms