Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MIR141-201ENST00000384975 95 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 RNA5SP354-201ENST00000391247 136 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF144AP50876 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF144AP50876 NDUFB1P1-201ENST00000435191 180 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 AC009220.1-201ENST00000451614 275 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 RNU7-170P-201ENST00000459303 61 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 OR9P1P-201ENST00000496431 281 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 SNORA40.13-201ENST00000516379 120 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 RNU2-58P-201ENST00000516403 183 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 RNU6-365P-201ENST00000517113 106 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 AC096577.2-201ENST00000611455 153 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
RNF144AP50876 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RNF144AP50876 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNF144AP50876 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RNF144AP50876 MAPK10-253ENST00000641010 4072 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF144AP50876 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF144AP50876 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF144AP50876 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF144AP50876 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF144AP50876 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF144AP50876 RNU6-117P-201ENST00000365415 107 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 Y_RNA.486-201ENST00000384398 107 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 Y_RNA.549-201ENST00000384657 102 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 MIR570-201ENST00000384917 97 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 RNU2-37P-201ENST00000410695 177 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 RNA5SP136-201ENST00000410906 107 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 EDDM3CP-201ENST00000415977 425 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 AC002075.2-201ENST00000425207 252 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 AC010099.1-201ENST00000455434 375 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 RPS27P22-201ENST00000478056 241 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 RN7SL691P-201ENST00000494487 301 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 ATP5EP1-201ENST00000510257 156 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 AC007751.1-201ENST00000529260 376 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF144AP50876 AL356218.2-201ENST00000605264 187 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 AC006435.5-201ENST00000624486 112 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 AC090517.3-201ENST00000625170 141 ntBASIC3.87□□□□□ -1.79
RNF144AP50876 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF144AP50876 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF144AP50876 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF144AP50876 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
RNF144AP50876 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF144AP50876 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF144AP50876 AC000403.1-201ENST00000613696 3585 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF144AP50876 Y_RNA.796-201ENST00000364268 102 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 Y_RNA.799-201ENST00000364992 102 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 RNU6-1138P-201ENST00000365359 106 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 SNORA51.10-201ENST00000384418 136 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 MIR29B2-201ENST00000385055 81 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 AL138878.1-201ENST00000405131 347 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 HSPE1P26-201ENST00000405341 275 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 MIR1294-201ENST00000408503 142 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 RNA5SP306-201ENST00000411087 107 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 RPL18P10-201ENST00000425606 538 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 CALM2P4-201ENST00000430810 426 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 AC245102.2-201ENST00000448956 180 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 AC109327.1-201ENST00000471666 403 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 AP000867.2-201ENST00000532468 320 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF144AP50876 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
RNF144AP50876 MIR3129-201ENST00000581095 76 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 MIR7702-201ENST00000621931 59 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 AC002064.3-201ENST00000623448 346 ntBASIC3.86□□□□□ -1.79
RNF144AP50876 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF144AP50876 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF144AP50876 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF144AP50876 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.86□□□□□ -1.79
RNF144AP50876 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF144AP50876 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF144AP50876 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF144AP50876 RNU6-1113P-201ENST00000384348 107 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 MIR562-201ENST00000384894 95 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 AL590004.2-201ENST00000404787 371 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 AL159169.1-201ENST00000421119 127 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 AC063976.3-201ENST00000426849 329 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 RN7SL303P-201ENST00000469773 251 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 RPL32P34-201ENST00000486380 400 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 AC025554.1-201ENST00000505641 188 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 RNU6-970P-201ENST00000516312 107 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 AC025647.1-201ENST00000517879 253 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 CYCSP29-201ENST00000533731 318 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 uc_338.14-201ENST00000613162 166 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 AC002076.2-201ENST00000617362 122 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.85□□□□□ -1.79
RNF144AP50876 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RNF144AP50876 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF144AP50876 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF144AP50876 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RNF144AP50876 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RNF144AP50876 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF144AP50876 AF117829.1-206ENST00000621883 3802 ntBASIC3.84□□□□□ -1.79
RNF144AP50876 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF144AP50876 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms