Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PRIM1P49642 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PRIM1P49642 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PRIM1P49642 AC006504.1-201ENST00000562493 3666 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 RNA5SP502-201ENST00000362694 119 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 RNA5SP50-201ENST00000363731 107 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 RNU1-57P-201ENST00000384491 166 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 Y_RNA.630-201ENST00000411370 108 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 AL121890.1-201ENST00000435457 205 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 HMGN2P20-201ENST00000437531 273 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 AC008155.2-201ENST00000464337 397 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 AC090515.1-201ENST00000465295 476 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 AC083906.5-201ENST00000503722 328 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 VWA8P1-201ENST00000510889 176 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.91□□□□□ -1.62
PRIM1P49642 MIR3690-201ENST00000580266 75 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 RMST_8.1-201ENST00000610287 165 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 AL110115.1-201ENST00000614396 364 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 AC106754.2-201ENST00000623006 233 ntBASIC4.91□□□□□ -1.62
PRIM1P49642 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
PRIM1P49642 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRIM1P49642 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRIM1P49642 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.9□□□□□ -1.62
PRIM1P49642 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRIM1P49642 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PRIM1P49642 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PRIM1P49642 RNU2-70P-201ENST00000410718 179 ntBASIC4.9□□□□□ -1.63
PRIM1P49642 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.9□□□□□ -1.63
PRIM1P49642 RPL32P34-201ENST00000486380 400 ntBASIC4.9□□□□□ -1.63
PRIM1P49642 RNU1-61P-201ENST00000516107 151 ntBASIC4.9□□□□□ -1.63
PRIM1P49642 AC097639.2-201ENST00000603159 172 ntBASIC4.9□□□□□ -1.63
PRIM1P49642 AC093732.2-201ENST00000607950 274 ntBASIC4.9□□□□□ -1.63
PRIM1P49642 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.9□□□□□ -1.63
PRIM1P49642 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.9□□□□□ -1.63
PRIM1P49642 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.9□□□□□ -1.63
PRIM1P49642 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.9□□□□□ -1.63
PRIM1P49642 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.89□□□□□ -1.63
PRIM1P49642 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PRIM1P49642 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRIM1P49642 MIRLET7F2-201ENST00000385277 83 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 AC126124.2-201ENST00000413542 321 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.89□□□□□ -1.63
PRIM1P49642 SNORD105B-201ENST00000458770 79 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 AP000873.1-201ENST00000463987 400 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
PRIM1P49642 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.89□□□□□ -1.63
PRIM1P49642 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.89□□□□□ -1.63
PRIM1P49642 SNORA62.6-201ENST00000606322 83 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 AC025166.1-201ENST00000612411 163 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 MIR8058-201ENST00000615737 89 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 AC006435.5-201ENST00000624486 112 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 snoZ196.1-201ENST00000625269 89 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 AC009487.4-201ENST00000624969 3585 ntBASIC4.89□□□□□ -1.63
PRIM1P49642 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.89□□□□□ -1.63
PRIM1P49642 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.89□□□□□ -1.63
PRIM1P49642 FAM35DP-201ENST00000323387 2712 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PRIM1P49642 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRIM1P49642 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRIM1P49642 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.88□□□□□ -1.63
PRIM1P49642 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRIM1P49642 SNORD9-201ENST00000362566 104 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 Y_RNA.124-201ENST00000363339 93 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 SNORA51.4-201ENST00000364993 124 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 CYCSP49-201ENST00000420810 319 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 CYCSP4-201ENST00000429682 331 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 RN7SL601P-201ENST00000471221 293 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 HMGN2P9-201ENST00000476875 229 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 RNU1-104P-201ENST00000517280 175 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 MIR4662B-201ENST00000579498 81 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 AL138880.2-201ENST00000616214 239 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 MIR6076-201ENST00000617521 113 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRIM1P49642 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRIM1P49642 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
PRIM1P49642 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.88□□□□□ -1.63
PRIM1P49642 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRIM1P49642 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.87□□□□□ -1.63
PRIM1P49642 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRIM1P49642 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.87□□□□□ -1.63
PRIM1P49642 RNU6-1279P-201ENST00000383917 103 ntBASIC4.87□□□□□ -1.63
PRIM1P49642 MIR128-1-201ENST00000384921 82 ntBASIC4.87□□□□□ -1.63
PRIM1P49642 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PRIM1P49642 AL133475.1-201ENST00000404414 305 ntBASIC4.87□□□□□ -1.63
PRIM1P49642 RNA5SP120-201ENST00000410900 112 ntBASIC4.87□□□□□ -1.63
PRIM1P49642 SNORA71B-202ENST00000439232 272 ntBASIC4.87□□□□□ -1.63
PRIM1P49642 RNA5SP310-201ENST00000459084 116 ntBASIC4.87□□□□□ -1.63
PRIM1P49642 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.87□□□□□ -1.63
PRIM1P49642 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRIM1P49642 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRIM1P49642 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRIM1P49642 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.86□□□□□ -1.63
PRIM1P49642 AL355796.1-201ENST00000406706 323 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 RBMY2UP-201ENST00000453474 324 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 RNU7-23P-201ENST00000459465 62 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 RAC1P2-201ENST00000511164 579 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 RNU5F-4P-201ENST00000516581 114 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 MIR4753-201ENST00000585119 83 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 AC020914.4-201ENST00000597690 277 ntBASIC4.86□□□□□ -1.63
PRIM1P49642 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms