Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.1□□□□□ -2.07
RXRGP48443 RNU6-1088P-201ENST00000516850 104 ntBASIC2.1□□□□□ -2.07
RXRGP48443 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.1□□□□□ -2.07
RXRGP48443 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.1□□□□□ -2.07
RXRGP48443 SNORD11B-201ENST00000607707 90 ntBASIC2.1□□□□□ -2.07
RXRGP48443 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
RXRGP48443 AL160394.1-201ENST00000624765 724 ntBASIC2.1□□□□□ -2.07
RXRGP48443 ZNF299P-201ENST00000406845 1804 ntBASIC2.1□□□□□ -2.07
RXRGP48443 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RXRGP48443 U8.10-201ENST00000384260 133 ntBASIC2.09□□□□□ -2.07
RXRGP48443 RNU6-975P-201ENST00000384296 105 ntBASIC2.09□□□□□ -2.07
RXRGP48443 U8.13-201ENST00000390842 128 ntBASIC2.09□□□□□ -2.07
RXRGP48443 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.09□□□□□ -2.07
RXRGP48443 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRGP48443 HMGB1P18-201ENST00000438801 619 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AC069257.2-201ENST00000441819 155 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRGP48443 AC007677.1-201ENST00000445757 515 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRGP48443 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRGP48443 Y_RNA.682-201ENST00000516457 100 ntBASIC2.09□□□□□ -2.07
RXRGP48443 SNORA25.14-201ENST00000516481 132 ntBASIC2.09□□□□□ -2.07
RXRGP48443 RNU1-117P-201ENST00000517041 158 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.09□□□□□ -2.07
RXRGP48443 AC134698.4-201ENST00000523451 826 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AL590705.4-201ENST00000532209 134 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AC060780.3-201ENST00000589464 80 ntBASIC2.09□□□□□ -2.07
RXRGP48443 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.09□□□□□ -2.07
RXRGP48443 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
RXRGP48443 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RXRGP48443 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RXRGP48443 MIR340-201ENST00000362125 95 ntBASIC2.08□□□□□ -2.08
RXRGP48443 RNU1-96P-201ENST00000364163 162 ntBASIC2.08□□□□□ -2.08
RXRGP48443 RNU6-593P-201ENST00000364716 112 ntBASIC2.08□□□□□ -2.08
RXRGP48443 MIR549A-201ENST00000385268 96 ntBASIC2.08□□□□□ -2.08
RXRGP48443 MIR1253-201ENST00000408273 105 ntBASIC2.08□□□□□ -2.08
RXRGP48443 AC074085.1-201ENST00000413598 418 ntBASIC2.08□□□□□ -2.08
RXRGP48443 MTCO3P46-201ENST00000425787 232 ntBASIC2.08□□□□□ -2.08
RXRGP48443 AC107399.1-201ENST00000451226 265 ntBASIC2.08□□□□□ -2.08
RXRGP48443 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.08□□□□□ -2.08
RXRGP48443 RNU6-329P-201ENST00000459618 107 ntBASIC2.08□□□□□ -2.08
RXRGP48443 FO393415.2-201ENST00000480085 343 ntBASIC2.08□□□□□ -2.08
RXRGP48443 RPL36AP21-201ENST00000490372 323 ntBASIC2.08□□□□□ -2.08
RXRGP48443 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.08□□□□□ -2.08
RXRGP48443 RNU6-1041P-201ENST00000516254 102 ntBASIC2.08□□□□□ -2.08
RXRGP48443 RNU6-58P-201ENST00000517143 103 ntBASIC2.08□□□□□ -2.08
RXRGP48443 AC022254.1-201ENST00000567857 235 ntBASIC2.08□□□□□ -2.08
RXRGP48443 MIR3198-2-201ENST00000577868 80 ntBASIC2.08□□□□□ -2.08
RXRGP48443 MIR5696-201ENST00000578474 85 ntBASIC2.08□□□□□ -2.08
RXRGP48443 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.08□□□□□ -2.08
RXRGP48443 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.08□□□□□ -2.08
RXRGP48443 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RXRGP48443 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RXRGP48443 RNU1-62P-201ENST00000362599 164 ntBASIC2.07□□□□□ -2.08
RXRGP48443 Y_RNA.301-201ENST00000364990 103 ntBASIC2.07□□□□□ -2.08
RXRGP48443 MIR520A-201ENST00000384862 85 ntBASIC2.07□□□□□ -2.08
RXRGP48443 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RXRGP48443 AL356776.1-201ENST00000406574 447 ntBASIC2.07□□□□□ -2.08
RXRGP48443 RNA5SP100-201ENST00000410903 110 ntBASIC2.07□□□□□ -2.08
RXRGP48443 RNA5SP59-201ENST00000410922 110 ntBASIC2.07□□□□□ -2.08
RXRGP48443 MTND3P8-201ENST00000412909 339 ntBASIC2.07□□□□□ -2.08
RXRGP48443 Z82188.1-201ENST00000436709 154 ntBASIC2.07□□□□□ -2.08
RXRGP48443 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.07□□□□□ -2.08
RXRGP48443 RNU7-57P-201ENST00000459540 60 ntBASIC2.07□□□□□ -2.08
RXRGP48443 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
RXRGP48443 HMGN2P9-201ENST00000476875 229 ntBASIC2.07□□□□□ -2.08
RXRGP48443 AC082651.2-201ENST00000496833 166 ntBASIC2.07□□□□□ -2.08
RXRGP48443 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.07□□□□□ -2.08
RXRGP48443 RNU6-358P-201ENST00000516564 75 ntBASIC2.07□□□□□ -2.08
RXRGP48443 RNU6-295P-201ENST00000516901 104 ntBASIC2.07□□□□□ -2.08
RXRGP48443 Y_RNA.706-201ENST00000516933 99 ntBASIC2.07□□□□□ -2.08
RXRGP48443 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
RXRGP48443 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.07□□□□□ -2.08
RXRGP48443 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
RXRGP48443 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.07□□□□□ -2.08
RXRGP48443 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
RXRGP48443 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.07□□□□□ -2.08
RXRGP48443 AC010928.2-201ENST00000588017 287 ntBASIC2.07□□□□□ -2.08
RXRGP48443 AC010900.2-201ENST00000604508 210 ntBASIC2.07□□□□□ -2.08
RXRGP48443 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.07□□□□□ -2.08
RXRGP48443 AC092794.1-201ENST00000612734 582 ntBASIC2.07□□□□□ -2.08
RXRGP48443 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.07□□□□□ -2.08
RXRGP48443 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RXRGP48443 RNA5SP99-201ENST00000364020 114 ntBASIC2.06□□□□□ -2.08
RXRGP48443 RNU2-2P-201ENST00000410396 191 ntBASIC2.06□□□□□ -2.08
RXRGP48443 RNU6-1148P-201ENST00000410992 104 ntBASIC2.06□□□□□ -2.08
RXRGP48443 AC007098.1-201ENST00000420122 367 ntBASIC2.06□□□□□ -2.08
RXRGP48443 AC008134.1-201ENST00000420943 193 ntBASIC2.06□□□□□ -2.08
RXRGP48443 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.06□□□□□ -2.08
RXRGP48443 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.06□□□□□ -2.08
RXRGP48443 MTCO3P29-201ENST00000432119 779 ntBASIC2.06□□□□□ -2.08
RXRGP48443 FTH1P12-201ENST00000432137 551 ntBASIC2.06□□□□□ -2.08
RXRGP48443 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
RXRGP48443 AC018710.1-201ENST00000506509 158 ntBASIC2.06□□□□□ -2.08
RXRGP48443 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.06□□□□□ -2.08
RXRGP48443 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
RXRGP48443 AC011406.1-201ENST00000512440 370 ntBASIC2.06□□□□□ -2.08
RXRGP48443 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.06□□□□□ -2.08
RXRGP48443 MIR4742-201ENST00000581069 85 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms