Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNU1-42P-201ENST00000364033 160 ntBASIC1.86□□□□□ -2.11
ATRXP46100 RNU1-51P-201ENST00000365345 176 ntBASIC1.86□□□□□ -2.11
ATRXP46100 RNU6-35P-201ENST00000384530 107 ntBASIC1.86□□□□□ -2.11
ATRXP46100 Z82188.1-201ENST00000436709 154 ntBASIC1.86□□□□□ -2.11
ATRXP46100 RPL23AP14-201ENST00000468281 468 ntBASIC1.86□□□□□ -2.11
ATRXP46100 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.86□□□□□ -2.11
ATRXP46100 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.86□□□□□ -2.11
ATRXP46100 AC004852.3-201ENST00000614131 326 ntBASIC1.86□□□□□ -2.11
ATRXP46100 AC007485.1-201ENST00000616755 206 ntBASIC1.86□□□□□ -2.11
ATRXP46100 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.86□□□□□ -2.11
ATRXP46100 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ATRXP46100 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.86□□□□□ -2.11
ATRXP46100 MIR96-201ENST00000362288 78 ntBASIC1.85□□□□□ -2.11
ATRXP46100 RNU6-490P-201ENST00000362985 107 ntBASIC1.85□□□□□ -2.11
ATRXP46100 U8.8-201ENST00000365399 135 ntBASIC1.85□□□□□ -2.11
ATRXP46100 RNU6-166P-201ENST00000384371 107 ntBASIC1.85□□□□□ -2.11
ATRXP46100 RNU6-306P-201ENST00000384617 107 ntBASIC1.85□□□□□ -2.11
ATRXP46100 MIR767-201ENST00000390228 109 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AL139109.1-201ENST00000455491 297 ntBASIC1.85□□□□□ -2.11
ATRXP46100 MED28P2-201ENST00000475771 317 ntBASIC1.85□□□□□ -2.11
ATRXP46100 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.85□□□□□ -2.11
ATRXP46100 RN7SKP295-201ENST00000517264 153 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AP003733.2-201ENST00000529409 171 ntBASIC1.85□□□□□ -2.11
ATRXP46100 U4.1-201ENST00000620349 87 ntBASIC1.85□□□□□ -2.11
ATRXP46100 HAUS6P2-201ENST00000433254 2404 ntBASIC1.85□□□□□ -2.11
ATRXP46100 Y_RNA.64-201ENST00000362845 102 ntBASIC1.85□□□□□ -2.11
ATRXP46100 Y_RNA.405-201ENST00000383979 100 ntBASIC1.85□□□□□ -2.11
ATRXP46100 Y_RNA.451-201ENST00000384200 100 ntBASIC1.85□□□□□ -2.11
ATRXP46100 Y_RNA.524-201ENST00000384564 100 ntBASIC1.85□□□□□ -2.11
ATRXP46100 Y_RNA.561-201ENST00000384694 100 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AC004866.1-201ENST00000411748 78 ntBASIC1.85□□□□□ -2.11
ATRXP46100 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.85□□□□□ -2.11
ATRXP46100 AL591043.1-201ENST00000432461 424 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AC244670.1-201ENST00000436879 112 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.85□□□□□ -2.11
ATRXP46100 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.85□□□□□ -2.11
ATRXP46100 AC079354.2-201ENST00000453523 154 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AC112771.1-201ENST00000463581 102 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AC018437.1-201ENST00000492214 406 ntBASIC1.85□□□□□ -2.11
ATRXP46100 Y_RNA.721-201ENST00000517207 102 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AC144568.1-201ENST00000520139 137 ntBASIC1.85□□□□□ -2.11
ATRXP46100 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.85□□□□□ -2.11
ATRXP46100 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
ATRXP46100 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.85□□□□□ -2.11
ATRXP46100 MIR6086-201ENST00000638065 55 ntBASIC1.85□□□□□ -2.11
ATRXP46100 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ATRXP46100 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ATRXP46100 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ATRXP46100 RNA5SP295-201ENST00000362655 121 ntBASIC1.84□□□□□ -2.11
ATRXP46100 snoU2_19.2-201ENST00000363024 80 ntBASIC1.84□□□□□ -2.11
ATRXP46100 Y_RNA.158-201ENST00000363651 101 ntBASIC1.84□□□□□ -2.11
ATRXP46100 Y_RNA.422-201ENST00000384054 114 ntBASIC1.84□□□□□ -2.11
ATRXP46100 RNU6-505P-201ENST00000384427 107 ntBASIC1.84□□□□□ -2.11
ATRXP46100 RNU6-823P-201ENST00000391042 103 ntBASIC1.84□□□□□ -2.11
ATRXP46100 SNORA26.3-201ENST00000391119 136 ntBASIC1.84□□□□□ -2.11
ATRXP46100 MIR548P-201ENST00000408336 84 ntBASIC1.84□□□□□ -2.11
ATRXP46100 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.84□□□□□ -2.11
ATRXP46100 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.84□□□□□ -2.11
ATRXP46100 MTCO2P24-201ENST00000515611 426 ntBASIC1.84□□□□□ -2.11
ATRXP46100 RNU4-71P-201ENST00000516258 113 ntBASIC1.84□□□□□ -2.11
ATRXP46100 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.84□□□□□ -2.11
ATRXP46100 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.84□□□□□ -2.11
ATRXP46100 HMGN2P15-201ENST00000585707 270 ntBASIC1.84□□□□□ -2.11
ATRXP46100 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
ATRXP46100 AC018462.2-201ENST00000605375 395 ntBASIC1.84□□□□□ -2.11
ATRXP46100 Y_RNA.277-201ENST00000364754 102 ntBASIC1.84□□□□□ -2.12
ATRXP46100 RNU6-596P-201ENST00000365395 98 ntBASIC1.84□□□□□ -2.12
ATRXP46100 Y_RNA.455-201ENST00000384230 98 ntBASIC1.84□□□□□ -2.12
ATRXP46100 Y_RNA.483-201ENST00000384380 101 ntBASIC1.84□□□□□ -2.12
ATRXP46100 HSPE1P26-201ENST00000405341 275 ntBASIC1.84□□□□□ -2.12
ATRXP46100 Y_RNA.618-201ENST00000410949 107 ntBASIC1.84□□□□□ -2.12
ATRXP46100 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.12
ATRXP46100 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.84□□□□□ -2.12
ATRXP46100 RNU7-87P-201ENST00000459343 62 ntBASIC1.84□□□□□ -2.12
ATRXP46100 RPL30P5-201ENST00000494923 336 ntBASIC1.84□□□□□ -2.12
ATRXP46100 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.12
ATRXP46100 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.84□□□□□ -2.12
ATRXP46100 AC025281.1-201ENST00000567026 265 ntBASIC1.84□□□□□ -2.12
ATRXP46100 AC138305.3-201ENST00000624988 240 ntBASIC1.84□□□□□ -2.12
ATRXP46100 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.84□□□□□ -2.12
ATRXP46100 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ATRXP46100 RNU6-874P-201ENST00000362390 105 ntBASIC1.83□□□□□ -2.12
ATRXP46100 Y_RNA.44-201ENST00000362676 108 ntBASIC1.83□□□□□ -2.12
ATRXP46100 Y_RNA.144-201ENST00000363521 113 ntBASIC1.83□□□□□ -2.12
ATRXP46100 SNORA7.1-201ENST00000363750 139 ntBASIC1.83□□□□□ -2.12
ATRXP46100 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.83□□□□□ -2.12
ATRXP46100 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
ATRXP46100 MIR548F4-201ENST00000408515 105 ntBASIC1.83□□□□□ -2.12
ATRXP46100 RNU2-54P-201ENST00000410299 190 ntBASIC1.83□□□□□ -2.12
ATRXP46100 SDAD1P3-201ENST00000427380 333 ntBASIC1.83□□□□□ -2.12
ATRXP46100 MTCYBP9-201ENST00000431021 303 ntBASIC1.83□□□□□ -2.12
ATRXP46100 U8.20-201ENST00000459445 131 ntBASIC1.83□□□□□ -2.12
ATRXP46100 RPS29P12-201ENST00000460178 152 ntBASIC1.83□□□□□ -2.12
ATRXP46100 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.83□□□□□ -2.12
ATRXP46100 MIR5696-201ENST00000578474 85 ntBASIC1.83□□□□□ -2.12
ATRXP46100 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.83□□□□□ -2.12
ATRXP46100 AC104695.3-201ENST00000604052 296 ntBASIC1.83□□□□□ -2.12
ATRXP46100 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.83□□□□□ -2.12
ATRXP46100 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
ATRXP46100 RNU6-600P-201ENST00000362524 99 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms