Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 U4.6-201ENST00000621618 127 ntBASIC3.42□□□□□ -1.86
CCNFP41002 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
CCNFP41002 AC021753.1-201ENST00000635724 168 ntBASIC3.42□□□□□ -1.86
CCNFP41002 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.42□□□□□ -1.86
CCNFP41002 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.42□□□□□ -1.86
CCNFP41002 AC010329.5-201ENST00000623497 2174 ntBASIC3.42□□□□□ -1.86
CCNFP41002 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCNFP41002 MAPK10-362ENST00000641864 4484 ntBASIC3.42□□□□□ -1.86
CCNFP41002 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCNFP41002 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.42□□□□□ -1.86
CCNFP41002 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCNFP41002 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCNFP41002 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
CCNFP41002 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.41□□□□□ -1.86
CCNFP41002 Y_RNA.304-201ENST00000365011 112 ntBASIC3.41□□□□□ -1.86
CCNFP41002 MIR218-2-201ENST00000385006 110 ntBASIC3.41□□□□□ -1.86
CCNFP41002 MIR29B2-201ENST00000385055 81 ntBASIC3.41□□□□□ -1.86
CCNFP41002 MIR483-201ENST00000385070 76 ntBASIC3.41□□□□□ -1.86
CCNFP41002 MIR548B-201ENST00000385247 97 ntBASIC3.41□□□□□ -1.86
CCNFP41002 AL357139.1-201ENST00000407792 426 ntBASIC3.41□□□□□ -1.86
CCNFP41002 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
CCNFP41002 YME1L1P1-201ENST00000429435 297 ntBASIC3.41□□□□□ -1.86
CCNFP41002 MICF-203ENST00000432679 129 ntBASIC3.41□□□□□ -1.86
CCNFP41002 Z75741.1-201ENST00000446793 314 ntBASIC3.41□□□□□ -1.86
CCNFP41002 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
CCNFP41002 RNU6-1098P-201ENST00000516772 96 ntBASIC3.41□□□□□ -1.86
CCNFP41002 RNA5SP380-201ENST00000517190 98 ntBASIC3.41□□□□□ -1.86
CCNFP41002 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
CCNFP41002 MIR7515-201ENST00000637837 67 ntBASIC3.41□□□□□ -1.86
CCNFP41002 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.41□□□□□ -1.86
CCNFP41002 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.41□□□□□ -1.86
CCNFP41002 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CCNFP41002 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
CCNFP41002 RNA5SP383-201ENST00000362934 120 ntBASIC3.4□□□□□ -1.87
CCNFP41002 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCNFP41002 Y_RNA.506-201ENST00000384494 102 ntBASIC3.4□□□□□ -1.87
CCNFP41002 SNORA40.19-201ENST00000390846 128 ntBASIC3.4□□□□□ -1.87
CCNFP41002 RNU6-763P-201ENST00000390865 106 ntBASIC3.4□□□□□ -1.87
CCNFP41002 RPS29P4-201ENST00000414733 161 ntBASIC3.4□□□□□ -1.87
CCNFP41002 U8.19-201ENST00000459095 133 ntBASIC3.4□□□□□ -1.87
CCNFP41002 RPL27AP5-201ENST00000469428 449 ntBASIC3.4□□□□□ -1.87
CCNFP41002 SRIP1-201ENST00000489235 288 ntBASIC3.4□□□□□ -1.87
CCNFP41002 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNFP41002 RNU6-1219P-201ENST00000516143 112 ntBASIC3.4□□□□□ -1.87
CCNFP41002 RNU1-143P-201ENST00000516296 146 ntBASIC3.4□□□□□ -1.87
CCNFP41002 Y_RNA.703-201ENST00000516846 111 ntBASIC3.4□□□□□ -1.87
CCNFP41002 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.4□□□□□ -1.87
CCNFP41002 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNFP41002 AL355596.1-201ENST00000565399 3996 ntBASIC3.4□□□□□ -1.87
CCNFP41002 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
CCNFP41002 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
CCNFP41002 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
CCNFP41002 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
CCNFP41002 U2.22-201ENST00000636441 106 ntBASIC3.4□□□□□ -1.87
CCNFP41002 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCNFP41002 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNFP41002 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCNFP41002 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCNFP41002 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CCNFP41002 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CCNFP41002 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCNFP41002 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCNFP41002 U3.8-201ENST00000363675 217 ntBASIC3.39□□□□□ -1.87
CCNFP41002 SNORD115-30-201ENST00000364117 82 ntBASIC3.39□□□□□ -1.87
CCNFP41002 SNORA68.1-201ENST00000364537 132 ntBASIC3.39□□□□□ -1.87
CCNFP41002 SNORA19-201ENST00000384737 128 ntBASIC3.39□□□□□ -1.87
CCNFP41002 RNU7-14P-201ENST00000459331 62 ntBASIC3.39□□□□□ -1.87
CCNFP41002 AC091021.1-201ENST00000468051 388 ntBASIC3.39□□□□□ -1.87
CCNFP41002 RPS29P2-201ENST00000479278 136 ntBASIC3.39□□□□□ -1.87
CCNFP41002 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.39□□□□□ -1.87
CCNFP41002 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNFP41002 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNFP41002 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNFP41002 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
CCNFP41002 AC019176.2-201ENST00000611579 315 ntBASIC3.39□□□□□ -1.87
CCNFP41002 U6.106-201ENST00000636360 105 ntBASIC3.39□□□□□ -1.87
CCNFP41002 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.39□□□□□ -1.87
CCNFP41002 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCNFP41002 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.38□□□□□ -1.87
CCNFP41002 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCNFP41002 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CCNFP41002 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCNFP41002 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.38□□□□□ -1.87
CCNFP41002 RNA5SP119-201ENST00000362715 117 ntBASIC3.38□□□□□ -1.87
CCNFP41002 SNORD32B-201ENST00000364460 84 ntBASIC3.38□□□□□ -1.87
CCNFP41002 SNORA67.2-201ENST00000384300 149 ntBASIC3.38□□□□□ -1.87
CCNFP41002 RNU6-125P-201ENST00000384505 107 ntBASIC3.38□□□□□ -1.87
CCNFP41002 MIR218-1-201ENST00000384999 110 ntBASIC3.38□□□□□ -1.87
CCNFP41002 Y_RNA.637-201ENST00000459424 114 ntBASIC3.38□□□□□ -1.87
CCNFP41002 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.38□□□□□ -1.87
CCNFP41002 RNU6-1212P-201ENST00000517023 104 ntBASIC3.38□□□□□ -1.87
CCNFP41002 MRPS18CP4-201ENST00000535821 231 ntBASIC3.38□□□□□ -1.87
CCNFP41002 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.38□□□□□ -1.87
CCNFP41002 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.38□□□□□ -1.87
CCNFP41002 AC023043.3-201ENST00000593113 385 ntBASIC3.38□□□□□ -1.87
CCNFP41002 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.38□□□□□ -1.87
CCNFP41002 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCNFP41002 MIR7157-201ENST00000635801 60 ntBASIC3.38□□□□□ -1.87
CCNFP41002 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCNFP41002 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms