Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RMST_6.1-201ENST00000611980 203 ntBASIC1.73□□□□□ -2.13
HMGCLP35914 AC025253.1-201ENST00000613623 543 ntBASIC1.73□□□□□ -2.13
HMGCLP35914 ZNF299P-201ENST00000406845 1804 ntBASIC1.73□□□□□ -2.13
HMGCLP35914 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGCLP35914 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGCLP35914 MIR340-201ENST00000362125 95 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNA5SP276-201ENST00000362580 94 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGCLP35914 RNA5SP213-201ENST00000391031 106 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 HMGN2P39-201ENST00000398005 273 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNU6-1050P-201ENST00000410388 107 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNA5SP494-201ENST00000410653 129 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 RNU2-41P-201ENST00000410991 178 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AL590556.1-201ENST00000423231 483 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 Z82188.1-201ENST00000436709 154 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.72□□□□□ -2.13
HMGCLP35914 snoU13.6-201ENST00000458785 104 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGCLP35914 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGCLP35914 HSBP1P1-201ENST00000555205 166 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 MIR548S-201ENST00000581352 82 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AC005014.2-201ENST00000607795 599 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 AL132765.2-201ENST00000610812 351 ntBASIC1.72□□□□□ -2.13
HMGCLP35914 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGCLP35914 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGCLP35914 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.142-201ENST00000363491 102 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.263-201ENST00000364659 114 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.533-201ENST00000384596 114 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 MIR208B-201ENST00000401172 77 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 AC096920.1-201ENST00000423991 241 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AL035666.1-201ENST00000446195 348 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 MTND5P20-201ENST00000448677 143 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AL137159.1-201ENST00000452808 512 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCLP35914 AC016925.1-201ENST00000458303 298 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 snoU13.30-201ENST00000458951 104 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 ATP5EP1-201ENST00000510257 156 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 SNORA4.4-201ENST00000515921 135 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 Y_RNA.708-201ENST00000516950 96 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC027288.2-201ENST00000553028 243 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC026470.2-201ENST00000561492 181 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC109446.1-201ENST00000566172 220 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGCLP35914 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC022202.1-201ENST00000613515 211 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.71□□□□□ -2.14
HMGCLP35914 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGCLP35914 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HMGCLP35914 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGCLP35914 Y_RNA.99-201ENST00000363138 105 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 Y_RNA.404-201ENST00000383978 102 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 SNORA67.2-201ENST00000384300 149 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-601P-201ENST00000384540 107 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 MIR1283-2-201ENST00000408621 87 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC004866.1-201ENST00000411748 78 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 HMGN2P18-201ENST00000450680 270 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGCLP35914 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGCLP35914 RN7SKP210-201ENST00000459176 261 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 FO393415.2-201ENST00000480085 343 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGCLP35914 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-965P-201ENST00000516721 96 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 RNU6-1098P-201ENST00000516772 96 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGCLP35914 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HMGCLP35914 AC005668.1-201ENST00000571142 476 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC005730.3-201ENST00000583067 366 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 MIR4298-201ENST00000584380 73 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC016727.2-201ENST00000603988 621 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 AC016727.1-205ENST00000605437 569 ntBASIC1.7□□□□□ -2.14
HMGCLP35914 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGCLP35914 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HMGCLP35914 RNU6-1188P-201ENST00000363795 107 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 SNORD31B-201ENST00000364977 69 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 MIR29C-201ENST00000385231 88 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 RNU6-1093P-201ENST00000391194 107 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGCLP35914 Z82205.1-201ENST00000428456 297 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 Y_RNA.635-201ENST00000459041 101 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 TOMM22P6-201ENST00000465035 409 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGCLP35914 RNA5SP54-201ENST00000516951 92 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 CBX3P8-201ENST00000532412 525 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC026271.5-201ENST00000577873 130 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC113139.1-201ENST00000605049 239 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AC009229.3-201ENST00000608056 282 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 TCL6_2.1-201ENST00000615162 119 ntBASIC1.69□□□□□ -2.14
HMGCLP35914 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms