Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL121594.1-201ENST00000475906 575 ntBASIC2.61□□□□□ -1.99
CIITAP33076 AC010469.2-201ENST00000496412 480 ntBASIC2.61□□□□□ -1.99
CIITAP33076 Y_RNA.715-201ENST00000517082 110 ntBASIC2.61□□□□□ -1.99
CIITAP33076 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.61□□□□□ -1.99
CIITAP33076 AC090617.3-201ENST00000573670 475 ntBASIC2.61□□□□□ -1.99
CIITAP33076 7SK.7-201ENST00000603504 247 ntBASIC2.61□□□□□ -1.99
CIITAP33076 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.61□□□□□ -1.99
CIITAP33076 AL021879.1-201ENST00000611756 288 ntBASIC2.61□□□□□ -1.99
CIITAP33076 MTND5P6-201ENST00000422338 1798 ntBASIC2.61□□□□□ -1.99
CIITAP33076 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
CIITAP33076 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CIITAP33076 AP006437.1-201ENST00000641440 3685 ntBASIC2.61□□□□□ -1.99
CIITAP33076 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CIITAP33076 RNU4-15P-201ENST00000362613 141 ntBASIC2.6□□□□□ -1.99
CIITAP33076 SNORD115-8-201ENST00000363856 82 ntBASIC2.6□□□□□ -1.99
CIITAP33076 SNORD115-38-201ENST00000365037 82 ntBASIC2.6□□□□□ -1.99
CIITAP33076 Y_RNA.424-201ENST00000384063 103 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RNU6-318P-201ENST00000384283 103 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RNU1-57P-201ENST00000384491 166 ntBASIC2.6□□□□□ -1.99
CIITAP33076 MIR153-2-201ENST00000385225 87 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RNU1-139P-201ENST00000391307 165 ntBASIC2.6□□□□□ -1.99
CIITAP33076 SNORA3.2-201ENST00000408221 125 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RNA5SP201-201ENST00000410316 124 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RNU6-101P-201ENST00000410323 104 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RPS26P42-201ENST00000413485 326 ntBASIC2.6□□□□□ -1.99
CIITAP33076 RNU6-58P-201ENST00000517143 103 ntBASIC2.6□□□□□ -1.99
CIITAP33076 AL442163.3-201ENST00000554110 156 ntBASIC2.6□□□□□ -1.99
CIITAP33076 AC091544.4-201ENST00000555268 342 ntBASIC2.6□□□□□ -1.99
CIITAP33076 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.6□□□□□ -1.99
CIITAP33076 AC005520.5-201ENST00000613926 164 ntBASIC2.6□□□□□ -1.99
CIITAP33076 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.6□□□□□ -1.99
CIITAP33076 AL138825.1-201ENST00000618587 192 ntBASIC2.6□□□□□ -1.99
CIITAP33076 MIR6766-201ENST00000622641 72 ntBASIC2.6□□□□□ -1.99
CIITAP33076 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CIITAP33076 RNA5SP432-201ENST00000362480 116 ntBASIC2.59□□□□□ -1.99
CIITAP33076 RNU6-1301P-201ENST00000362724 104 ntBASIC2.59□□□□□ -1.99
CIITAP33076 RNU1-72P-201ENST00000362976 153 ntBASIC2.59□□□□□ -1.99
CIITAP33076 Y_RNA.380-201ENST00000365663 111 ntBASIC2.59□□□□□ -1.99
CIITAP33076 MIR10B-201ENST00000385011 110 ntBASIC2.59□□□□□ -1.99
CIITAP33076 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
CIITAP33076 RNU6-130P-201ENST00000411112 103 ntBASIC2.59□□□□□ -1.99
CIITAP33076 AC114482.1-201ENST00000418010 247 ntBASIC2.59□□□□□ -1.99
CIITAP33076 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.59□□□□□ -1.99
CIITAP33076 EIF4EP4-201ENST00000424916 578 ntBASIC2.59□□□□□ -1.99
CIITAP33076 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.59□□□□□ -1.99
CIITAP33076 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.59□□□□□ -1.99
CIITAP33076 UBL5P4-201ENST00000562584 236 ntBASIC2.59□□□□□ -1.99
CIITAP33076 MIR3136-201ENST00000583498 78 ntBASIC2.59□□□□□ -1.99
CIITAP33076 AC125232.2-201ENST00000592457 143 ntBASIC2.59□□□□□ -1.99
CIITAP33076 AC073410.2-201ENST00000603240 332 ntBASIC2.59□□□□□ -1.99
CIITAP33076 AL355297.3-201ENST00000604082 446 ntBASIC2.59□□□□□ -1.99
CIITAP33076 AL034555.1-201ENST00000604816 211 ntBASIC2.59□□□□□ -1.99
CIITAP33076 RAC1P9-201ENST00000604990 392 ntBASIC2.59□□□□□ -1.99
CIITAP33076 U4atac.1-201ENST00000618345 95 ntBASIC2.59□□□□□ -1.99
CIITAP33076 MIR5739-201ENST00000619803 80 ntBASIC2.59□□□□□ -1.99
CIITAP33076 AC064859.1-201ENST00000624741 174 ntBASIC2.59□□□□□ -1.99
CIITAP33076 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.58□□□□□ -2
CIITAP33076 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CIITAP33076 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CIITAP33076 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
CIITAP33076 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CIITAP33076 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CIITAP33076 Y_RNA.27-201ENST00000362540 103 ntBASIC2.58□□□□□ -2
CIITAP33076 Y_RNA.144-201ENST00000363521 113 ntBASIC2.58□□□□□ -2
CIITAP33076 RNU6-1210P-201ENST00000363775 107 ntBASIC2.58□□□□□ -2
CIITAP33076 Y_RNA.319-201ENST00000365138 92 ntBASIC2.58□□□□□ -2
CIITAP33076 RNU6-574P-201ENST00000384265 107 ntBASIC2.58□□□□□ -2
CIITAP33076 RNU6-378P-201ENST00000384324 107 ntBASIC2.58□□□□□ -2
CIITAP33076 Y_RNA.551-201ENST00000384661 102 ntBASIC2.58□□□□□ -2
CIITAP33076 MIR549A-201ENST00000385268 96 ntBASIC2.58□□□□□ -2
CIITAP33076 RNU6-159P-201ENST00000391080 106 ntBASIC2.58□□□□□ -2
CIITAP33076 RNU6-1109P-201ENST00000391187 107 ntBASIC2.58□□□□□ -2
CIITAP33076 RPL21P1-201ENST00000399532 476 ntBASIC2.58□□□□□ -2
CIITAP33076 CBX3P9-201ENST00000402326 552 ntBASIC2.58□□□□□ -2
CIITAP33076 RNA5SP508-201ENST00000411327 119 ntBASIC2.58□□□□□ -2
CIITAP33076 AC003685.2-201ENST00000422795 395 ntBASIC2.58□□□□□ -2
CIITAP33076 WARS2P1-201ENST00000429678 537 ntBASIC2.58□□□□□ -2
CIITAP33076 MTCYBP9-201ENST00000431021 303 ntBASIC2.58□□□□□ -2
CIITAP33076 AL445305.1-201ENST00000432577 575 ntBASIC2.58□□□□□ -2
CIITAP33076 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.58□□□□□ -2
CIITAP33076 AC096638.1-201ENST00000444678 216 ntBASIC2.58□□□□□ -2
CIITAP33076 FCF1P4-201ENST00000448326 183 ntBASIC2.58□□□□□ -2
CIITAP33076 MTCO3P8-201ENST00000453691 755 ntBASIC2.58□□□□□ -2
CIITAP33076 AC073901.1-201ENST00000462471 408 ntBASIC2.58□□□□□ -2
CIITAP33076 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.58□□□□□ -2
CIITAP33076 CKS1BP2-201ENST00000497342 240 ntBASIC2.58□□□□□ -2
CIITAP33076 AC008413.1-201ENST00000511864 177 ntBASIC2.58□□□□□ -2
CIITAP33076 MTCO2P24-201ENST00000515611 426 ntBASIC2.58□□□□□ -2
CIITAP33076 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
CIITAP33076 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.58□□□□□ -2
CIITAP33076 AC131281.1-201ENST00000522984 164 ntBASIC2.58□□□□□ -2
CIITAP33076 AC008269.2-201ENST00000561915 1105 ntBASIC2.58□□□□□ -2
CIITAP33076 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
CIITAP33076 CYP4A27P-201ENST00000567218 190 ntBASIC2.58□□□□□ -2
CIITAP33076 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
CIITAP33076 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.58□□□□□ -2
CIITAP33076 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.58□□□□□ -2
CIITAP33076 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CIITAP33076 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms