Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXC12P31275 MTND2P29-201ENST00000438595 412 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 AC115115.1-201ENST00000449927 248 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 RNU7-120P-201ENST00000459334 63 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 AC083906.5-201ENST00000503722 328 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 AC026784.1-201ENST00000507986 352 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
HOXC12P31275 RNY3P16-201ENST00000516338 101 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC12P31275 AC008011.1-201ENST00000545989 227 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC12P31275 AC008873.1-201ENST00000625051 138 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 MIR7157-201ENST00000635801 60 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC12P31275 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HOXC12P31275 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC12P31275 Z83843.1-201ENST00000604070 3685 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC12P31275 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC12P31275 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HOXC12P31275 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC12P31275 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC12P31275 Y_RNA.180-201ENST00000363867 113 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 SNORD115-30-201ENST00000364117 82 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 RNU6-923P-201ENST00000364753 107 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 RNU6-47P-201ENST00000383866 107 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 RNU6-211P-201ENST00000384047 107 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 AL031003.1-201ENST00000404229 172 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 COX6CP10-201ENST00000416832 224 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC12P31275 CYCSP4-201ENST00000429682 331 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
HOXC12P31275 Z96811.1-201ENST00000445880 108 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 AL049873.1-201ENST00000480540 376 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXC12P31275 RNU6-56P-201ENST00000516986 93 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC12P31275 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HOXC12P31275 AC010329.5-201ENST00000623497 2174 ntBASIC3.19□□□□□ -1.9
HOXC12P31275 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC12P31275 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC12P31275 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXC12P31275 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXC12P31275 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC12P31275 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HOXC12P31275 Y_RNA.243-201ENST00000364481 109 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 SNORA68.1-201ENST00000364537 132 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 Y_RNA.308-201ENST00000365043 101 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 RNU6-234P-201ENST00000365229 104 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 DYNLT3P1-201ENST00000378574 347 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 U6atac.2-201ENST00000408644 118 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 RNA5SP120-201ENST00000410900 112 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 AC126124.2-201ENST00000413542 321 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 BTF3P11-201ENST00000426582 477 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 HMGN2P9-201ENST00000476875 229 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 RN7SKP83-201ENST00000516512 178 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 AC087441.2-201ENST00000529141 262 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.18□□□□□ -1.9
HOXC12P31275 AC010620.2-201ENST00000600135 313 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 U6.115-201ENST00000636045 103 ntBASIC3.18□□□□□ -1.9
HOXC12P31275 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC12P31275 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC12P31275 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC12P31275 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HOXC12P31275 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC12P31275 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC12P31275 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC12P31275 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC12P31275 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HOXC12P31275 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HOXC12P31275 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC12P31275 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC12P31275 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 MIR128-1-201ENST00000384921 82 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 MIR300-201ENST00000401138 83 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 MIR1283-1-201ENST00000408494 87 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 AL139281.1-201ENST00000422120 335 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 AC104332.1-201ENST00000440471 797 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 AP001486.1-201ENST00000463339 476 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 AC022559.1-201ENST00000520905 205 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 AC009127.3-201ENST00000570531 403 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 AC105245.1-201ENST00000581934 244 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 MIR4753-201ENST00000585119 83 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXC12P31275 AL365265.1-201ENST00000621045 234 ntBASIC3.17□□□□□ -1.9
HOXC12P31275 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.17□□□□□ -1.9
HOXC12P31275 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HOXC12P31275 MFSD8-236ENST00000641509 4050 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC12P31275 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC12P31275 RNU6-1272P-201ENST00000362776 107 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 Y_RNA.262-201ENST00000364641 102 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 MIR1185-2-201ENST00000408687 86 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms