Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 BX322639.1-202ENST00000423987 2213 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
COL4A5P29400 RNU6-552P-201ENST00000362869 119 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 Y_RNA.170-201ENST00000363746 110 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 SNORD32A-201ENST00000364805 84 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AL355143.1-201ENST00000407101 841 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.43□□□□□ -2.34
COL4A5P29400 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
COL4A5P29400 RPL23AP95-201ENST00000426806 265 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AL365184.2-201ENST00000431139 435 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC074290.1-201ENST00000448883 135 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 RNU7-182P-201ENST00000459009 62 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.43□□□□□ -2.34
COL4A5P29400 RNU6-856P-201ENST00000516959 98 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 RNU6-685P-201ENST00000517088 95 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 ELOCP32-201ENST00000548625 324 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC025423.5-201ENST00000550230 219 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.43□□□□□ -2.34
COL4A5P29400 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.43□□□□□ -2.34
COL4A5P29400 TPRKBP2-201ENST00000565969 475 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 MIR5006-201ENST00000583027 110 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AL391994.1-201ENST00000254724 282 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 U3.8-201ENST00000363675 217 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 RNU5F-7P-201ENST00000363696 115 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 RNA5SP368-201ENST00000364298 116 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 RNU6-393P-201ENST00000384475 107 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 Y_RNA.504-201ENST00000384481 104 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 RNU6-1093P-201ENST00000391194 107 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AL117342.1-201ENST00000404861 406 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC063976.4-201ENST00000421971 163 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC011233.1-201ENST00000422812 283 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.43□□□□□ -2.34
COL4A5P29400 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.43□□□□□ -2.34
COL4A5P29400 AC079781.2-201ENST00000446424 169 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 MTATP6P14-201ENST00000455189 673 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC048334.1-201ENST00000477975 159 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 RAP1BP2-201ENST00000478270 544 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 Vault.3-201ENST00000516676 95 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AC069113.1-201ENST00000517763 267 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 Z83818.1-201ENST00000603584 150 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AL031281.1-201ENST00000604049 488 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 AP000240.1-201ENST00000609910 452 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 SEPT14P19-203ENST00000633205 211 ntBASIC0.43□□□□□ -2.34
COL4A5P29400 MTND4P9-201ENST00000507819 1346 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
COL4A5P29400 snoU2-30.2-201ENST00000362805 70 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 SNORD115-7-201ENST00000365306 82 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 AC006461.1-201ENST00000412637 326 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A5P29400 RAB28P5-201ENST00000427490 651 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A5P29400 SNAP23P1-201ENST00000433229 246 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 MTATP6P16-201ENST00000434543 526 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A5P29400 RPL39P39-201ENST00000455840 151 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.42□□□□□ -2.34
COL4A5P29400 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A5P29400 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.42□□□□□ -2.34
COL4A5P29400 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A5P29400 AL391840.1-201ENST00000571144 367 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 MIR3682-201ENST00000581338 84 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 AC068792.1-201ENST00000621354 417 ntBASIC0.42□□□□□ -2.34
COL4A5P29400 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
COL4A5P29400 RNU6-975P-201ENST00000384296 105 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 MIR10B-201ENST00000385011 110 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 MIR942-201ENST00000401111 86 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 MIR320B2-201ENST00000408479 138 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AC010154.1-201ENST00000425857 269 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.41□□□□□ -2.34
COL4A5P29400 AC244023.1-201ENST00000426884 112 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.41□□□□□ -2.34
COL4A5P29400 AC245047.7-201ENST00000440265 293 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.41□□□□□ -2.34
COL4A5P29400 AL163973.1-201ENST00000484753 577 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AC010486.2-201ENST00000505572 483 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AC090572.1-201ENST00000519251 160 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 MIR5190-201ENST00000581537 80 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AC073539.2-201ENST00000597113 165 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AC242498.1-201ENST00000604134 111 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 Z98751.3-201ENST00000604447 521 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 AC243994.1-201ENST00000618627 109 ntBASIC0.41□□□□□ -2.34
COL4A5P29400 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.41□□□□□ -2.34
COL4A5P29400 RNU6-534P-201ENST00000364877 106 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 RNU6-336P-201ENST00000364891 107 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 RNU6-1029P-201ENST00000384109 107 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 SNORA80D-201ENST00000384488 135 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 RNU6-110P-201ENST00000384508 104 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
COL4A5P29400 MIR208B-201ENST00000401172 77 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.4□□□□□ -2.34
COL4A5P29400 AC114482.1-201ENST00000418010 247 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 USP9YP28-201ENST00000435142 589 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.4□□□□□ -2.34
COL4A5P29400 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.4□□□□□ -2.34
COL4A5P29400 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.4□□□□□ -2.34
COL4A5P29400 RNU7-34P-201ENST00000459394 64 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 AC091951.3-201ENST00000504093 246 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 HMGB1P29-201ENST00000505659 499 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 SNORA31.2-201ENST00000516019 134 ntBASIC0.4□□□□□ -2.34
COL4A5P29400 AL121579.1-201ENST00000555129 305 ntBASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms