Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 RNU6-95P-201ENST00000384697 107 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 RNU6-373P-201ENST00000411247 98 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 MTCO1P21-201ENST00000416634 589 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 EBAG9P1-201ENST00000418955 543 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 MTCO3P18-201ENST00000440206 761 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AC009237.7-201ENST00000447357 229 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AC007215.1-201ENST00000464893 276 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 HMGN1P13-201ENST00000505795 138 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AC067942.3-201ENST00000512025 362 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 RNU6-1041P-201ENST00000516254 102 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 Y_RNA.676-201ENST00000516393 96 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 RNU6-256P-201ENST00000516747 97 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 RNU6-856P-201ENST00000516959 98 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.54□□□□□ -2.16
PTPN6P29350 RRN3P3-201ENST00000549207 578 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.54□□□□□ -2.16
PTPN6P29350 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.54□□□□□ -2.16
PTPN6P29350 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.54□□□□□ -2.16
PTPN6P29350 POLR3GP2-201ENST00000588366 668 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AL138726.1-201ENST00000614873 333 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AC024614.3-201ENST00000637860 256 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.54□□□□□ -2.16
PTPN6P29350 MTND4P5-201ENST00000435821 1374 ntBASIC1.54□□□□□ -2.16
PTPN6P29350 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.54□□□□□ -2.16
PTPN6P29350 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
PTPN6P29350 RNU6-414P-201ENST00000363705 104 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 RNU1-96P-201ENST00000364163 162 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 AL590632.1-201ENST00000424289 371 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 AC108667.1-201ENST00000428618 249 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 NFU1P2-201ENST00000448700 469 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.53□□□□□ -2.16
PTPN6P29350 RN7SKP210-201ENST00000459176 261 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 AC108729.3-201ENST00000513484 108 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 RNU6-948P-201ENST00000516374 107 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 RNU2-34P-201ENST00000516534 121 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.53□□□□□ -2.16
PTPN6P29350 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PTPN6P29350 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.53□□□□□ -2.16
PTPN6P29350 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.53□□□□□ -2.16
PTPN6P29350 Y_RNA.414-201ENST00000384011 101 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 MIR520A-201ENST00000384862 85 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 MIR517A-201ENST00000385001 87 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 Y_RNA.595-201ENST00000410403 105 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.52□□□□□ -2.17
PTPN6P29350 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.52□□□□□ -2.17
PTPN6P29350 AC099677.2-201ENST00000436385 175 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 AC074290.1-201ENST00000448883 135 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.52□□□□□ -2.17
PTPN6P29350 MTND1P11-201ENST00000456661 876 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 RNU7-66P-201ENST00000459469 62 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 ACA59.1-201ENST00000515966 143 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.52□□□□□ -2.17
PTPN6P29350 SCARNA4-201ENST00000629045 128 ntBASIC1.52□□□□□ -2.17
PTPN6P29350 ZNF204P-201ENST00000416749 2397 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 SNORD50.1-201ENST00000362987 71 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 RNY4P14-201ENST00000363656 96 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 Y_RNA.318-201ENST00000365131 97 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 RNU6-296P-201ENST00000384608 107 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 Y_RNA.554-201ENST00000384672 102 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 SNORA17.3-201ENST00000391159 129 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 RPL23AP36-201ENST00000413895 458 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.51□□□□□ -2.17
PTPN6P29350 AC060773.1-201ENST00000421698 310 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 DAP3P1-201ENST00000441522 278 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 snoU13.30-201ENST00000458951 104 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 RPL36AP21-201ENST00000490372 323 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 MTCO2P30-201ENST00000503662 364 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 AC011406.1-201ENST00000512440 370 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 MIR4498-201ENST00000577599 66 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 MIR3672-201ENST00000584290 82 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 AC019193.3-201ENST00000609144 554 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.51□□□□□ -2.17
PTPN6P29350 AC010615.1-201ENST00000594254 1764 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 BX322639.1-202ENST00000423987 2213 ntBASIC1.51□□□□□ -2.17
PTPN6P29350 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PTPN6P29350 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PTPN6P29350 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PTPN6P29350 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PTPN6P29350 MIR378A-201ENST00000362177 66 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNU6-1305P-201ENST00000364353 104 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNU6-1019P-201ENST00000364424 107 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNU4-12P-201ENST00000365233 139 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNU6-975P-201ENST00000384296 105 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNU6-1235P-201ENST00000384559 107 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 Y_RNA.573-201ENST00000384763 105 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.5□□□□□ -2.17
PTPN6P29350 AC016717.1-201ENST00000448918 286 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 AC079354.2-201ENST00000453523 154 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNU6-498P-201ENST00000459468 107 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 HMGN2P9-201ENST00000476875 229 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNU6-720P-201ENST00000516363 108 ntBASIC1.5□□□□□ -2.17
PTPN6P29350 RNA5SP384-201ENST00000516615 116 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms